KEGG   Novosphingobium sp. THN1: C7W88_07280
Entry
C7W88_07280       CDS       T05635                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
not  Novosphingobium sp. THN1
Pathway
not03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:not00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C7W88_07280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:not03400]
    C7W88_07280
Enzymes [BR:not01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     C7W88_07280
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     C7W88_07280
DNA repair and recombination proteins [BR:not03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     C7W88_07280
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AXU18870
UniProt: A0A3B7DJ12
Position
1476613..1477425
AA seq 270 aa
MPELPEVETTVRGLATVLEGQVITSVRVNRADLRRPFPVDLAQALTGARVTGLARRAKYG
LIHTDRERTMVFHLGMSGRWRIDPEDIGKHDHLVLETGEGRVLSLNDARRFGSVDLVDSD
KLASWPQFAALGPEPLGPDLTPKVLAKAFKDRIAAVKLLLLDQRIVAGLGNIYVCEALYR
ARVHPAREGGKVKPGELKLLVPAIKAVLEESIVAGGSTLRDYARPDGELGYFAKDFAVYG
REGEPCTCGGTVERIVQGGRSSFFCAKCQK
NT seq 813 nt   +upstreamnt  +downstreamnt
atgccggaattgccagaagtagagacgaccgttcgcggccttgcaaccgtgctggagggg
caggtgatcacgagcgttcgggtgaaccgtgccgatctgcggcggccgtttccggtcgat
ctggcgcaggcgctgaccggtgcgcgggtgacggggctggcgcggcgggccaagtatggc
ctgatccataccgaccgcgagcggacgatggtgttccacctcggcatgtcgggacgctgg
cgaatcgatccggaagacatcggcaagcacgaccacctcgtgctggagaccggggaaggc
agggtcctgtcgctgaacgatgcgcggcggttcggttccgtggaccttgtcgacagcgac
aagctggcgagctggccgcaattcgcggcactggggccggagccattgggacctgatctg
acgccgaaggtgctggcaaaggcgttcaaggaccgcattgcggcggtgaaattgttgctg
ctcgaccagcgcatcgtggcggggctgggcaatatctatgtgtgcgaagcgctctatcgc
gcgcgagtgcatccggcgcgcgagggcgggaaggtcaagccgggcgaactgaagctgctc
gtcccggcgatcaaggcggtgctggaggaatccatcgtggccggcggatcgaccttgcgc
gactatgcccggcccgacggcgagctgggctatttcgccaaggactttgccgtctatggc
cgcgagggcgagccgtgcacctgcggcggcaccgtggagcgcatcgtccaaggcgggcga
tcgtcgttcttctgtgcgaagtgccagaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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