KEGG   Novosphingobium sp. P6W: TQ38_004560
Entry
TQ38_004560       CDS       T05550                                 
Name
(GenBank) type I secretion system permease/ATPase
  KO
K11004  ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nov  Novosphingobium sp. P6W
Pathway
nov02010  ABC transporters
nov03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nov00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    TQ38_004560
   03070 Bacterial secretion system
    TQ38_004560
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:nov02000]
    TQ38_004560
   02044 Secretion system [BR:nov02044]
    TQ38_004560
Transporters [BR:nov02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    TQ38_004560
Secretion system [BR:nov02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   TQ38_004560
SSDB
Motif
Pfam: ABC_membrane ABC_tran Peptidase_C39 SMC_N ABC_ATPase AAA_16 AAA_22 AAA_29 SbcC_Walker_B DUF87 AAA_21 AAA_18 RsgA_GTPase
Other DBs
NCBI-ProteinID: AXB75878
UniProt: A0A2Z5E8T8
Position
1:912220..914394
AA seq 724 aa
MNDMHNPELTETLPPRDDSGLFAFATVLALHRIAVDPQQLRHGLGHDRAIDADDLKRLAK
RQDEVRAKSSRGSFDKLRQMPLPALANGPAGWFVIARVADDEVLIQPPCHSVDGVQPQIM
KIGRDALEAMWSGELLLVTTREGVGGVSRAFDVSWFIPQIVKYRRLIGEVLLITLGINLL
GLASPLFFQNVIDKVLVHNTLDTLTILVIGFGVVSVWETAFGWLRTRLYSETSQKIDVEL
GAKLFRHLLGLNLSYFEARRVGDIAMRVRQLETIREFLTNASLTVLVDPIFTVIFLIVMW
FYSTQLFLISILTIPCYIAVAVFITGPLRARIEEKFERSAANNALLIESIGGIQTVKAGA
VEPQWQDRWERQLAGYSFASQKVINLGNTGSQLIQLISKINMVLILYFGARAVIDKDLTV
GGLVAFNMFAQRVSGPVIRMAQLWQEFQQVRIAIERLGDVLNQPIEPGTGSRVALPQLKG
AVAFESVRFRYGLDGPWTLDDIDLIVPAGSTLGIVGSSGSGKSTLTKLLQRLYVPGAGRV
TIDGVDIAQIDPAWLRRQIGVVLQENLLFSRTIRENIALSNPAMPIEKVMAAAELAGAHE
FIVKLPQGYDTLVEERGTNLSGGQRQRLAIARALVNQPRILILDEATSALDAESEEIIQR
NLKAMAAGRTVIIIAHRLSAVRQCDTLIALEAGRIVERGNHEELLRANGRYADLHRRQSG
GIAA
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgaatgacatgcataatcccgagctgacagaaacactgcccccgcgagacgatagcggt
cttttcgcgttcgcgacggttctcgcgctgcaccgcattgccgtcgatccacaacagctg
cgccacggccttgggcatgaccgcgcgatcgatgccgacgatctcaagcgtctcgccaag
cgtcaggacgaggtccgcgccaaatcgtcgcgaggcagtttcgacaagctgcgccagatg
ccgctacccgcgctcgccaatggccccgcgggctggttcgtcatcgcccgggtggcggac
gacgaagttctgatccaaccgccgtgccactcagttgacggcgtgcagccgcagatcatg
aagatcggtcgtgacgcgctcgaggcaatgtggtcgggcgagctgctactggtgaccacc
cgcgaaggcgttggcggggtcagccgggcctttgacgtcagctggttcattccgcagatc
gtcaagtaccggcgtctgatcggcgaggtcctgcttattacgctggggatcaatcttctc
gggctcgcctcaccgctattcttccagaatgtcatcgacaaggtgctcgtccacaatacc
ctcgacaccctgaccatcctggtgatcgggttcggcgtcgtgtccgtctgggaaacggcc
ttcggatggctgcgtacccggctctattccgagacgagccagaagatcgatgtcgagctc
ggggcaaagctgttccgccacctgctcggcctcaacctctcctacttcgaggcgcgccgg
gtcggcgacatcgccatgcgcgttcgccaactcgagacgatccgggagtttctcactaac
gcatcgttgaccgtactggtcgatccgatcttcacggtcatcttcctgatcgtgatgtgg
ttctactccacccagcttttcttgatctcgatcctgacgatcccctgctacatcgcggtc
gccgttttcatcaccggtccgctgcgcgcgcggatcgaagagaagtttgagcggtccgca
gccaacaacgccctgctcatcgagagcatcggtggcatccagacggtaaaggccggcgcg
gtcgagccgcagtggcaggatcgctgggagcgccagctcgccggctacagcttcgcctcg
cagaaggtcatcaatctcggcaacactggcagccagctgatccagctgatctccaagatc
aacatggtgctgatcctctatttcggcgcgcgcgcggtgatcgataaggacctgaccgtc
ggcggactggtggcgttcaacatgttcgcgcagcgggtttccggtccggtcatccgcatg
gcgcagctgtggcaggaattccagcaggtgcgcattgccatcgagcgtctcggtgacgtg
ctcaaccagcctatcgagcccggtaccggcagccgtgtagcattgccgcagctcaagggt
gccgttgctttcgaaagcgtgagatttcgctacggtctggatggtccctggaccctcgac
gacatcgacctgatcgttccggcgggctcgacactgggcatcgtcggttcttccggatcg
ggcaagtcgacgctcacaaagcttctgcagcggctctacgtgcccggggccgggcgcgtc
accatcgacggtgtcgacatcgcccaaatcgatccggcatggctccgtcggcagatcggc
gtcgtcctccaggaaaacctcctgttcagccggacaatccgcgagaacatcgcgctgtcc
aatccggccatgccgatcgagaaggtcatggccgcagccgaactcgccggggcgcacgag
ttcatcgtcaagctgccgcagggctatgacaccctcgtcgaagagcgcggtaccaatctg
tctggaggtcagcgccagcgtctcgcgatcgcccgcgccctagtcaatcagccgcgcatt
ctcattctcgatgaggcgaccagcgcgctcgatgccgagagcgaggagatcatccagcgc
aacctcaaggccatggcggcaggacgcaccgtgatcatcattgctcatcgcctttccgcc
gtccggcagtgcgataccctgatcgccctcgaggccggccgcattgtcgagcgcggtaac
catgaagagctcttgcgggcaaatggacgctatgccgacctccatcgccgccagagcgga
gggattgccgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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