KEGG   Novosphingobium sp. P6W: TQ38_019950
Entry
TQ38_019950       CDS       T05550                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nov  Novosphingobium sp. P6W
Pathway
nov00010  Glycolysis / Gluconeogenesis
nov00020  Citrate cycle (TCA cycle)
nov00260  Glycine, serine and threonine metabolism
nov00280  Valine, leucine and isoleucine degradation
nov00310  Lysine degradation
nov00380  Tryptophan metabolism
nov00620  Pyruvate metabolism
nov00630  Glyoxylate and dicarboxylate metabolism
nov00640  Propanoate metabolism
nov00785  Lipoic acid metabolism
nov01100  Metabolic pathways
nov01110  Biosynthesis of secondary metabolites
nov01120  Microbial metabolism in diverse environments
nov01200  Carbon metabolism
nov01210  2-Oxocarboxylic acid metabolism
nov01240  Biosynthesis of cofactors
Module
nov_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nov_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nov_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nov_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nov00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    TQ38_019950 (lpdA)
   00020 Citrate cycle (TCA cycle)
    TQ38_019950 (lpdA)
   00620 Pyruvate metabolism
    TQ38_019950 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    TQ38_019950 (lpdA)
   00640 Propanoate metabolism
    TQ38_019950 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TQ38_019950 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    TQ38_019950 (lpdA)
   00310 Lysine degradation
    TQ38_019950 (lpdA)
   00380 Tryptophan metabolism
    TQ38_019950 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    TQ38_019950 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nov04147]
    TQ38_019950 (lpdA)
Enzymes [BR:nov01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     TQ38_019950 (lpdA)
Exosome [BR:nov04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   TQ38_019950 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 GIDA UDPG_MGDP_dh_N 3HCDH_N FAD_binding_3 HI0933_like AlaDh_PNT_C FAD_oxidored DAO FAD_binding_2 Lys_Orn_oxgnase
Other DBs
NCBI-ProteinID: AXB79892
UniProt: A0A2Z5EJL4
Position
2:complement(796579..797964)
AA seq 461 aa
MKTETCKLLILGAGPGGYVCGIRAGQLGVDTIVVEAAKPGGTCLNVGCIPSKALIHAAGE
FAKARAFAEENELGIRGGVPTIDLQRTVAWKDSVVERLTRGVSGLLRKAKVRTIHGHAII
IDGKTVEIRNDDDPIRIRTENLVIATGSTPFELPSLPFGGRVISSTDALSLIQVPAKLAI
VGGGYIGLEIGIAMAKLGATVTVVEAAERILPQYDAELTDPVKKRLSEYGIALHLSANAS
GLGSSGDTLMVDTADGEVELPADLVLVTVGRQATTSGFGLESLGLSQNGPYLAIDDRCAT
SMRGVYAIGDVTGDPMLAHRAMAQGNMVAEIVAGKDISWDKRAIPAVCFTDPELVVAGLL
PSDPKAAEAKVSLFPFSANGRALSMERSDGFVRIVSDPKTDLVLGIQAVGAGVSEMAGQF
AMSLEMACTLTDIGETIHAHPTLGEVVQEAAMKGLGKAMHS
NT seq 1386 nt   +upstreamnt  +downstreamnt
gtgaagacagaaacatgtaagcttctcatccttggcgccggccctggagggtatgtctgc
ggcatccgcgcagggcagctcggcgtcgatacgatcgtggttgaagcggcaaagcctggt
ggaacctgtctcaacgttggctgcattccctcgaaggcattgattcatgctgccggtgaa
tttgcgaaagcgagagcattcgcggaagagaatgagctgggcatccgcggtggcgtacct
acgattgaccttcaacggacagtcgcgtggaaggattccgttgtcgagcgtttgacgcgg
ggcgtctccggtctgctcagaaaggctaaggttcgcacgatacatggccatgccatcatc
atcgacggcaagacggtcgaaatccgcaacgacgacgatccgatccggattcgcactgaa
aatctcgtgatcgcgacgggttcaaccccattcgaactgccatcactgccgttcggcggt
cgcgtgatcagttcgaccgatgccctgtcgctaatacaggtcccggctaaactcgctatc
gtcgggggcggctatatcgggctggagatcggcatagccatggcgaaactgggggctacg
gtcactgtagtggaggcagcggaacggatcttgccgcaatatgatgctgaactcacggat
ccggttaagaagcgtctttccgagtatggcatcgcactacacctctccgcaaatgccagt
ggcctgggctccagtggcgataccctgatggtcgataccgccgatggggaggttgagctt
ccggccgatctggttctcgtgaccgtggggcggcaggcgaccacatccgggtttgggctg
gaaagcctggggctgagtcaaaatggcccatatctcgcgattgacgaccgctgcgccaca
tccatgcggggtgtatatgccattggggacgtgacgggggatcctatgcttgcccaccgg
gcaatggcccaaggcaacatggttgctgaaatcgtggcgggcaaagacattagctgggac
aaaagggccattccagcagtctgcttcaccgatcccgagcttgtcgtcgcgggcttgctt
cccagcgatcccaaggcggcagaggccaaggtctctttgtttccgttcagcgcgaatggg
cgtgcgctttcgatggagcgtagcgacggctttgtgcggatagtatccgatccgaagaca
gaccttgttttgggcattcaggcagttggtgccggtgtttctgagatggccgggcaattt
gccatgtcgttggaaatggcttgtacgctgacagacatcggcgagacgattcacgcccac
ccaacgctcggtgaagttgtccaggaagcggcgatgaaggggttgggcaaggcaatgcac
agctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (84)   

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