KEGG   Nocardioides euryhalodurans: EXE57_00875
Entry
EXE57_00875       CDS       T05931                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
noy  Nocardioides euryhalodurans
Pathway
noy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:noy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EXE57_00875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:noy03019]
    EXE57_00875
   03009 Ribosome biogenesis [BR:noy03009]
    EXE57_00875
Enzymes [BR:noy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EXE57_00875
Messenger RNA biogenesis [BR:noy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EXE57_00875
Ribosome biogenesis [BR:noy03009]
 Prokaryotic type
  rRNA helicases
   EXE57_00875
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 UvrA_inter HEM4 AIRS_C P-loop_SecA
Other DBs
NCBI-ProteinID: QBR90980
UniProt: A0A4P7GGJ6
Position
193314..195032
AA seq 572 aa
MSDEVREQEQGVTFGDLGLDPRVLEAVREVGYETPSPIQAATIPTLLEGRDLVGLAQTGT
GKTAAFALPILSRLDLKQKTPQALVLAPTRELALQVCEAFERYAAHVPGIHVLPVYGGQG
YGVQLSALRRGVHVVVGTPGRIMDHLDKGTLDLSELRFLVLDEADEMLNMGFAEDVETIL
ADTPTDKNVALFSATMPAQIRRISKKYLNDPAEITVKNKTATATNITQRYLTVSYPQKVD
ALTRILEVENFEGMIVFVRTKNETETLAEKLRARGFSAAAINGDVVQAQRERTIGQLKDA
KLDILVATDVAARGLDVERISHVVNYDIPTDPESYVHRIGRTGRAGRSGDAISFVTPRER
YLLKSIEKTTRQPLTQMQLPTVDDVNVTRLARFDDAITEALSATERVSFFRDVVSHYIRE
HDVPEVDVAAALAVVLQGDTPLLLDPEPVRPPRRERADQPGRGDRPERGGKRPPRHGDGP
PMATYRIAVGKRHKVEPRQIVGALANEGGLSRRDFGNISIRPDFSLVELPAELPPGTEEA
LASTRISGKLIGLRKDAGPRQSRPKQGKPPRD
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgtccgacgaggtgcgcgagcaagagcagggggtcaccttcggtgacctcgggctggat
ccccgagtcctcgaggcggtgcgcgaggtcggctacgagaccccgtcgccgatccaggcg
gcgaccatcccgacgctcctcgaggggcgcgacctcgtcggcctggcccagaccggcacc
ggcaagaccgccgcgttcgcgctgccgatcctctcgcgcctcgacctcaagcagaagacg
ccccaggcgctcgtgctggcgcccacccgtgagctcgcgctccaggtctgcgaagccttc
gagcggtacgccgcccacgtccccggcatccacgtgctgccggtctacggcggccagggc
tacggcgtccagctcagcgcgctgcgccgcggcgtccacgtcgtcgtgggcacccccggg
cggatcatggaccacctcgacaagggcacgctcgacctgagcgagctgcggttcctggtg
ctcgacgaggccgacgagatgctcaacatgggcttcgccgaggacgtcgagacgatcctc
gccgacacgccgaccgacaagaacgtcgcgctgttctcggccacgatgccggcgcagatc
aggcggatctcgaagaagtacctgaacgacccggccgagatcacggtcaagaacaagacc
gcgaccgccaccaacatcacccagcgctacctcacggtgtcctacccccagaaggtcgac
gccctcacccggatcctcgaggtcgagaacttcgaggggatgatcgtcttcgtccggacc
aagaacgagaccgagacgctcgcggagaagctccgcgcccgcggcttctcggccgccgcc
atcaacggcgacgtcgtgcaggcccagcgcgaacggaccatcggccagctcaaggacgcc
aagctcgacatcctggtcgccaccgacgtggccgcgcgcgggctcgacgtcgagcggatc
agccacgtcgtcaactacgacatcccgaccgaccccgagtcctacgtgcaccggatcggc
cggaccggccgcgccgggcgcagcggcgacgcgatctccttcgtcacgccccgcgagcgc
tacctgctgaagtcgatcgagaagaccacccgtcagccgctgacccagatgcagctgccg
accgtcgacgacgtcaacgtcaccaggctggcccgcttcgacgacgccatcaccgaggcg
ctctccgccaccgagcgggtctcgttcttccgcgacgtcgtgtcgcactacatccgtgag
cacgacgtccccgaggtcgacgtggccgcggcgctcgcggtcgtgctccagggcgacacg
cccctgctgctggaccccgagcccgtacgcccgccccggcgcgagcgcgccgaccagccg
ggccgtggcgaccgccccgagcggggtgggaagcgcccgccgaggcacggggacggaccg
ccgatggcgacctaccggatcgcggtcggcaagcgccacaaggtggagccgcgccagatc
gtcggcgcgctcgccaacgagggcggcctgagccgacgcgacttcggcaacatctcgatc
cgccccgacttctcgctcgtcgagctccccgccgagctgcccccgggcaccgaggaggcg
ctcgcgtcgacgcggatctccggcaagctcatcggcctgcgcaaggacgccgggccgcgg
cagagccgccccaagcagggcaagccgccccgcgactag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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