KEGG   Neofusicoccum parvum: UCRNP2_5443
Entry
UCRNP2_5443       CDS       T03126                                 
Name
(GenBank) putative dsb repair complex subunit protein
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
npa  Neofusicoccum parvum
Pathway
npa03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    UCRNP2_5443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npa03041]
    UCRNP2_5443
   03400 DNA repair and recombination proteins [BR:npa03400]
    UCRNP2_5443
Spliceosome [BR:npa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    UCRNP2_5443
DNA repair and recombination proteins [BR:npa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     UCRNP2_5443
SSDB
Motif
Pfam: Ku Ku_N Ku_C SAP SAP_new25
Other DBs
NCBI-ProteinID: EOD47778
UniProt: R1EJ00
Position
Unknown
AA seq 651 aa
MVERNPGLHFAPKIVASTTLADRSDDSVRRQCTNRLKWYMDESVRRSCANLHRLRTLQQH
PLRIAMANPSERYNREEEDEDEEEEALDETGYKTVKDAVLFAIDVSHSMLKKPPPSDSTK
ADRDSPTSAALKCAYQLMQQRIISHPNDMMGVLLFGTEQSRFQDEDAGGRGALQYPHCYL
LTDLDVPAAGDVKRLRNLVEDEEEAEKLLVPSDDPVSMANVLFCANQIFTTKAPNFTSRR
LFLVTDNDSPHADDKNLRQAAAVRAKDLYDLGVIIELFPIAHPENGFERSKFYDDIVYRP
QISDPEAPAPVTEAALPSERGDGISLLQSLISNINSKAAPRRALFSLPFEIGPGLKIGIK
GYILIKRQEKVRSCYVWMNGEKPQICIASSSKIAEDTAREVQKAEIRKAYKFGGETVSFT
EDETKAIRYFGDPVVRIIGFKPLSMLPEWANMRAPMFIYPTETDYIGSTRVFSALQQNLL
KKEKMAIAWFVPRRNAVPTLAALIPGQEKLGERNEQIRPPGLWVIPLPYVDDIRQNPETP
LVRASDNLTDIMRDIIQNLTLPKGEYDPSRYPNPALQWFYRILQAIALEDELPEKPEDKT
VPKYRQIDKRVGEKVVEWVPVLKEFAHSKHISVVGKKADIVERIEEYFEKK
NT seq 1956 nt   +upstreamnt  +downstreamnt
atggttgaacgcaatccagggctacatttcgcgcccaagatcgtcgcctccacaactctc
gcagaccgctccgatgacagtgtcaggcggcaatgcaccaaccgtctgaagtggtacatg
gatgagtctgtgaggcggtcgtgcgccaacctgcaccgtctccgcacgctgcaacaacac
ccgctgcgcatcgcaatggccaacccatcggagcgatacaatcgcgaggaggaagatgag
gacgaggaggaggaggcccttgatgagaccggctacaaaacggtcaaagatgccgtgctc
ttcgccatagatgtcagccactcaatgctgaagaagccgccgccctcagactcgacgaaa
gccgaccgcgattctcccacctcagccgccctaaaatgcgcttaccagctcatgcagcag
cgcatcatctcgcacccgaacgacatgatgggcgtcctgctctttggcaccgaacaatcc
agattccaagacgaggacgctggcggccgtggagctctccaatatccgcactgctatctg
ctgacggatctggacgtgccggccgctggcgacgtgaagcgcctgcggaatcttgtcgag
gacgaggaagaggccgagaagctgcttgtgccgtcggatgatccagtatccatggcaaat
gtactcttctgcgccaatcaaatcttcactacaaaggcgcccaatttcacgtcaaggcga
ctattcctcgtgaccgacaacgacagcccacatgcagacgataagaacttgaggcaagcc
gcagctgtgcgcgcaaaggacttgtacgatcttggagtcatcattgagctcttcccaatt
gctcatcctgagaatggcttcgagcggtcgaagttctacgatgacattgtctaccgcccg
caaatctctgatcccgaggctcccgcacctgtgaccgaagctgctctgccgtccgaaaga
ggcgacggtatcagtctcctccagtcgctcatatccaatatcaattccaaagctgccccg
cggcgtgcactgttctccttaccattcgagatcggtccaggattaaagatcggcatcaag
ggatatatcttgatcaagcgccaagagaaggttcgcagctgttatgtctggatgaacgga
gagaagcctcagatttgcattgcctcctcatcaaagattgctgaagacacagctcgcgag
gtgcaaaaggcggagatcaggaaagcctacaagtttggcggagagaccgtctcgtttacg
gaagatgaaaccaaagctatccgctactttggcgatcccgtcgttcgcatcatcgggttc
aagccgttatccatgttgcccgagtgggcaaacatgcgggctccgatgttcatctaccct
accgaaaccgactacatcggctccacccgcgtcttttccgctctgcaacaaaacttgttg
aagaaggaaaagatggccatcgcttggttcgtcccacgtcgcaacgctgtaccaacactc
gcagcgcttatcccggggcaggaaaaattgggcgagcgcaatgaacaaattagaccgcct
ggtctctgggtcatacccttgccatacgtcgacgatatccgccagaatcccgagacaccc
cttgtccgggcctctgacaacctgacagacatcatgcgtgacattattcaaaacttgact
ctcccaaagggcgagtacgacccaagccggtacccgaaccccgctctgcagtggttctac
cgcatcctccaagctatcgctttggaagacgagttaccggagaagccggaggataagaca
gtccccaagtatcggcagattgacaagcgcgtcggtgagaaggttgtcgagtgggtgcca
gtcttgaaggagttcgctcacagtaagcacatttctgttgtggggaagaaagcggatatt
gtcgagaggattgaggagtattttgagaagaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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