KEGG   Neofusicoccum parvum: UCRNP2_7398
Entry
UCRNP2_7398       CDS       T03126                                 
Name
(GenBank) putative transcription elongation factor spt6 protein
  KO
K11292  transcription elongation factor SPT6
Organism
npa  Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:npa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:npa03021]
    UCRNP2_7398
   03036 Chromosome and associated proteins [BR:npa03036]
    UCRNP2_7398
Transcription machinery [BR:npa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     UCRNP2_7398
Chromosome and associated proteins [BR:npa03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     UCRNP2_7398
SSDB
Motif
Pfam: SH2_2 YqgF HHH_7 HTH_44 Spt6_S1 SPT6_acidic HHH_9 SH2 B12-binding
Other DBs
NCBI-ProteinID: EOD45887
UniProt: R1EEI5
Position
Unknown
AA seq 1424 aa
MAHPLLDVAAELGSESDDADYDEEQAPKGQGKPSRRSGAVDDSSEEEDEDDDEEAAAAVR
EGFIVDEDEEDEEERRARRREKKKRRRAEREEEEAALDEEDLDLIGETVPREQTTQSKFK
RLKRGHREDHSPRGPRGVDDIFSDEDEDLGDGYDERPSRREARGGVTDEFADFIEEDVFD
DDEGLQDEEDREVARPGKRAVSGVGFPEAGLDEAEMEDYRNAFGDGTEYDWALDLQEQKD
EEEMGDEKPLELKDVFEPSQLAERLMTDEDNEIRFTDVPERFQLARKPFKQLELDEDEMA
NRMGVEALWVSKLLWPKKRLGQSCEQPFQKAVRKVLELMNIEDLEVPFIFNHRKDYLIHS
SSPQDQDDIDGNSGPQRLLTQGDLWEIFELDLKFRALSEKREALIKTYENLKSILDVQDT
VFETLLAKAESIEEVQDIQDYVHFTYSAQLKDVNTMEAESTGVQKRTRGGNTVFERIRAS
KVYNLVRAIGITPDDYAKNLQKEGHRLYPEDPQQMPEDLADTLVEPPEYNTTAVVLRSAK
AMFAEELVMSPRMRNIMRRTFYQAGLFDIYRTEKGLRKITEDHPYYEFKYLRNQEYSAMA
RRPELFLRMLKAEDEGMVEVKVRLQNYDRLRDDFRAMLFSDGTSELSTRWNEFRREVLDV
ALPKLERIIAKGVKETVKAECENALARQCKDRYAEKLDQAPYKPKGMQLGTIPRVLALSN
GNGIPGRDAVCYAWVDEEGRVLEQGKFNDLRPGNKEKYIPDAKDIEDLVEMVQRRKPDVI
GVSGFSVETRKLYKDLQQIVEDHDLRCADYEDEDGNEKTDRLEVVMVNDEIARLYHTSDR
SNLDHPGQPPLVKYCIALARFLQSPLKEYAALGKDIVSISFDPNQILLPQDKLMKYLEMA
MVDIVNLVGVEINDGLTDSYLANLLPYVCGLGPRKSQQLLKVINLNNGVVYTRDELVGDP
DKKILPAVGPKVWMNCASFLYIGYDPTEPESDYLDSTRVHPEDYDLGRKMAADALEMDEE
DIKAEQDENGPGAVVKRLIREDAQEKVNDLVLEEYAEQLEAQFHQRKRATLETIRAELQV
PYEELRNKYTYMTSDEIYTMLTGETRESLSEGHIVPVKIRRVFPDHIEARLDCGMEAVCN
EPEFPNNVGGERGVDPRQIFQANQTVQAKVTFLNRKALQCQVSFNEKQLKDGHHRHIDRP
RGEWAKEQEDADKDAEAKEKESKTGRAQRVIKHPLFRPFNAAQAEEYLGSQGRGDVVIRP
SSKGLDHLAVTWKVSDNVYQHIDVLELDKENEFSLGRTLKIGGKYTYSDLDELIVLHVKA
MAKKVDEMMTDEKYQQTSRAQTEQWLTTYTEANPKRSMYAFCINPKFPGYFHLCFKAGQQ
APLASWPVKVIPNAFELQKNHYPDMRALKNGFKLLFANNAARKR
NT seq 4275 nt   +upstreamnt  +downstreamnt
atggcgcatcccctgcttgacgtcgccgccgagctaggcagcgagtccgacgatgccgac
tacgacgaggaacaggctcccaagggccagggaaagccctcgcgccgatctggggccgtc
gacgattccagcgaggaggaggacgaggatgacgatgaggaggctgccgccgccgttcgc
gagggattcatcgttgacgaagatgaagaggacgaagaggaacggcgcgcccgcagacgc
gaaaagaagaagaggcgacgggctgagcgtgaagaggaagaggccgctttggacgaggag
gacctcgatctcatcggagagacggtccccagggaacagacgacacaatccaagttcaag
cgcctaaagcgtggccacagggaggaccattcgcctcgaggaccccgcggtgtcgacgac
atcttctccgacgaagacgaggatctcggcgacggctatgatgagagaccctcccggcga
gaggcccgaggcggcgtcacggatgaattcgccgacttcatcgaagaggatgtcttcgac
gacgatgaaggcttgcaggatgaggaagaccgggaggtggcaagacctggaaagagagcc
gtcagtggcgttggcttcccagaggctggcttggatgaggccgagatggaggactaccgg
aacgctttcggcgatggtaccgaatacgattgggctctggacctccaggaacagaaggac
gaggaggagatgggagatgaaaaaccattggagctgaaggacgtcttcgagccttctcag
ttggccgagaggttgatgacggacgaagacaacgaaatccgcttcaccgacgtccctgag
cgattccaactcgcgaggaagcccttcaagcagctagagcttgacgaggacgagatggcg
aaccgcatgggtgtggaggctctctgggtatcgaagctcttgtggcctaagaagcgtctt
gggcaaagctgcgaacaacccttccagaaggccgtccgcaaagttttggagctcatgaac
atcgaggacctggaagttcctttcatcttcaaccatcgcaaagactatttgatccattcc
agctccccgcaggaccaggatgatatcgacggaaactctggcccccagcgactcttgacc
caaggcgacttgtgggaaatctttgagttggacctgaagttccgggctttgtcggagaag
cgtgaggcactcatcaagacttacgagaacctgaagagcattttggatgtccaggacact
gtcttcgaaacgctactcgccaaggccgagtctatcgaggaggttcaagatattcaagac
tatgtccacttcacgtactctgctcagcttaaggacgtaaacaccatggaagccgagtct
actggtgtccagaaacggacccgcggcggcaatactgtgttcgagaggatccgagcaagc
aaagtttacaacctggttcgtgccatcgggatcacgcctgatgattatgccaagaacttg
cagaaggaaggccaccgcctgtaccccgaggatccccagcagatgccagaggatttagcc
gacacacttgtggaacccccggaatacaacacaaccgcagtcgttctgcgctcagcgaaa
gccatgttcgccgaagagcttgtcatgagcccaaggatgaggaacatcatgagacgcact
ttctatcaggccggtcttttcgacatctatcgcaccgaaaaaggccttcgcaagatcacc
gaggaccacccgtactacgagttcaagtacttgcgcaaccaggagtattcggctatggcc
cggagacccgagttatttctgcggatgctcaaggctgaggatgagggtatggttgaagtc
aaggtccgcttgcagaactatgacaggctcagggatgacttccgagcaatgctattctcg
gacggaactagcgagctttcgacaagatggaacgagttccgcagagaggttcttgacgtg
gccttgcctaagcttgagagaatcattgccaagggagtcaaggagactgtgaaggctgag
tgtgagaacgctctggccaggcagtgcaaggacagatacgcggagaagttggaccaagca
ccttacaagccaaagggcatgcaacttggtactatcccgagagtcctcgctctttccaac
ggcaacggcatccccggacgcgatgccgtctgctacgcgtgggtcgatgaagaaggacgt
gttctggagcaaggcaaattcaacgaccttcgtcctgggaacaaggagaagtacataccc
gacgccaaagacatcgaagatctcgtcgagatggtccagaggcggaaaccagatgttatt
ggtgtgtcgggtttttcggtcgagacacgtaaactctacaaggacctccagcagattgtt
gaagatcatgatcttcgttgcgccgattacgaggatgaggatggcaacgagaagaccgac
aggctcgaagtcgtcatggtcaacgacgaaatcgcccggctgtaccacaccagtgacagg
tctaatctggaccatcctggtcaacctccgctggtgaaatactgcattgctctggctcgc
ttcttgcaaagccccttgaaggagtacgcagctcttggcaaagatatcgtctccatttct
ttcgacccgaaccagatccttctccctcaggacaaactgatgaagtacctcgagatggcc
atggtggacattgtgaatctcgttggtgtcgaaatcaacgatggtctcaccgactcctac
cttgctaacttgcttccttatgtctgtggtcttggtccaagaaagtctcaacagctcctc
aaggtcatcaatctgaacaacggggttgtgtacacaagggacgagctcgttggcgaccct
gacaagaagattcttcccgctgtcggtcccaaggtctggatgaactgtgccagtttcctc
tacatcggctacgaccccaccgagcctgagtccgactatcttgattcgactcgtgtccac
cccgaagattacgaccttggccgcaagatggctgctgatgcgctcgagatggatgaggag
gacatcaaagccgaacaggatgaaaatgggcccggtgctgttgtcaagaggctgattcgg
gaggatgctcaggagaaggtgaatgaccttgtcctggaagagtatgccgagcagcttgag
gcgcaattccaccaacggaagcgggccactctcgaaacgattcgtgctgagctgcaggtg
ccgtacgaggaactgcgcaacaagtacacttacatgacttcggatgagatctacaccatg
ctcactggcgaaactcgcgagtcactttcagaaggccacatcgttcccgtcaagattcgc
cgagtctttcccgatcatatcgaggcgcgcttggattgtggcatggaagctgtatgcaac
gagcccgagttccctaacaatgttggtggcgagcgtggtgtagacccgcggcaaatcttc
caggcaaaccaaacggtgcaggcaaaggtcacattcctcaaccgtaaagctttgcaatgc
caggtctctttcaacgagaagcagctaaaggacggccatcaccggcacatcgatcggcca
agaggtgaatgggccaaagagcaggaagatgctgacaaggatgcggaggctaaggagaag
gaaagcaagactggtcgcgctcagcgtgtcatcaagcacccgctcttccgtccgttcaac
gccgcccaggcagaggagtatctgggctcccaaggtcgtggggatgtcgtcatccggcct
tcttccaagggtctggaccatcttgctgttacctggaaggtttcagacaacgtctaccag
cacatcgatgtgctggagctagataaggagaacgagttcagtctgggtcgcaccctcaag
attggcggaaagtacacgtacagtgatctggacgaactgatcgtgctgcacgtcaaagct
atggcgaagaaggttgacgagatgatgaccgatgagaagtaccagcagaccagcagggcg
caaactgagcaatggcttactacctataccgaggccaaccccaagcgcagcatgtatgcc
ttctgcatcaaccctaaattcccaggctacttccacctgtgcttcaaggcaggccagcaa
gccccgcttgcctcttggcctgtaaaagtcatcccgaacgcctttgagctccagaagaac
cactacccagacatgcgagcactgaagaacgggttcaaacttctctttgcgaacaacgct
gcccggaagcggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (42)   

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