KEGG   Natrinema pellirubrum: Natpe_4051
Entry
Natpe_4051        CDS       T02425                                 
Name
(GenBank) TATA-box binding protein (TBP), component of TFIID and TFIIIB
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
npe  Natrinema pellirubrum
Pathway
npe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:npe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Natpe_4051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:npe03000]
    Natpe_4051
   03021 Transcription machinery [BR:npe03021]
    Natpe_4051
Transcription factors [BR:npe03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    Natpe_4051
Transcription machinery [BR:npe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     Natpe_4051
  RNA polymerase III system
    TFIIIB
     Natpe_4051
  RNA polymerase I system
    SL1/TIF-1B
     Natpe_4051
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-ProteinID: AGB33776
UniProt: L0JTQ6
Position
pNATPE01:148687..149268
AA seq 193 aa
MLILHIGMITSEHSPTIENVVASTGVDRELNLEAVAEDLDGTDYDQERFPGAVYRTQNPK
SAALIFRSGKIVCTGAKSTDDVYESLNIVFDELRGLGIDVPSNPEITIQNIVSSGDLGSA
VNLNAIAIGFGLENIEYEPEQFPGLVYRMDDPNVVTLIFGSGKVVVTGAKEPADAGRALD
VISSRLDELGLLD
NT seq 582 nt   +upstreamnt  +downstreamnt
atgcttattctccatataggtatgatcacttcggaacactctcccacgatagagaatgtc
gtcgcttcaactggagtggatcgagaactcaacctcgaggcggtcgccgaagacctcgac
ggaacggactacgaccaagagaggttccccggggcagtttaccggacccagaacccgaaa
tccgccgcactgatcttccggtcgggcaagatcgtctgcacgggtgcgaaaagcaccgac
gacgtctacgaaagtctcaacattgtattcgatgaactccgtggcctaggtatcgacgtt
ccatctaatccagaaatcactatccaaaatatcgtttcgagtggcgacctcggatctgca
gtcaatctaaacgccatcgccatcggcttcggtctcgaaaacatcgaatacgaacccgag
caattcccgggtctggtctatcgcatggacgaccccaacgtggtcacccttatcttcggt
agcggcaaagtcgtcgtcacaggagcaaaagaaccggcggatgctggccgcgcactcgac
gttatctcgtcacgtctcgatgaactcggcctgttagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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