KEGG   Natronomonas pharaonis: NP_0446A
Entry
NP_0446A          CDS       T00279                                 
Name
(GenBank) homolog to DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
nph  Natronomonas pharaonis
Brite
KEGG Orthology (KO) [BR:nph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nph03032]
    NP_0446A
   03400 DNA repair and recombination proteins [BR:nph03400]
    NP_0446A
Enzymes [BR:nph01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     NP_0446A
DNA replication proteins [BR:nph03032]
 Prokaryotic type
  DNA Topoisomerases
   NP_0446A
DNA repair and recombination proteins [BR:nph03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NP_0446A
SSDB
Motif
Pfam: zf-C4_Topoisom NucS_N Zn-ribbon_8
Other DBs
NCBI-ProteinID: CAI48314
UniProt: A0A1U7ETQ8
Position
complement(228118..228840)
AA seq 240 aa
MPIRTITGDCLVRFEGPRDRTVRGTVLAVVKPDNTVLVHDIDGYQPAAWLTRASELSLTR
DPLWLVAVDGDETLRIEAVGDVTVTEHEATVAGTPVGNCRCGGDLVRSGGGVSCLDCGER
FGLPSGATTTGDDCSCGLPTVRVDRGEPFELCLDPDCGSLLEAVRAAFEGEWACPECGSD
LDIIRRGGLLAGCEQYPDCETAFSIPDGVVDGRCGCGLPVFETATGRRCLDTDCSVGRDR
NT seq 723 nt   +upstreamnt  +downstreamnt
atgccgatacgcaccatcaccggggattgtctcgtccgcttcgagggaccgcgggaccgc
actgtccgtggcaccgtactcgcggtcgtcaagcccgacaacaccgttctcgtccacgat
attgatggctatcagccggccgcgtggctcacccgcgcatcggagctatcgctgacccgt
gacccgctgtggctcgtcgctgtcgatggcgacgaaacgctccgtatcgaggccgtcggc
gacgtgaccgtcaccgaacacgaggcgaccgttgccggcacgcccgtcgggaactgccgc
tgtggcggcgacctcgtccgctccggcggcggagtctcctgtctcgactgtggcgagcgg
ttcggcctgccgagcggtgcgacaacgaccggcgacgactgttcgtgtgggctgccgacc
gtccgcgtcgaccgcggcgagccgttcgagttgtgtctcgaccccgactgtggctcacta
ttggaggcggtgcgggcggccttcgaaggcgagtgggcctgtccggagtgtggcagcgac
ctcgacatcatccgccgcggcggactgctcgccggctgtgagcagtatccggactgtgag
acggccttctcgatacccgacggtgtcgtcgacggccgctgtggttgcgggctgccggtc
ttcgagacggcaaccgggcgtcgctgtctcgacaccgactgttcggtggggcgcgaccgc
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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