KEGG   Novosphingobium pentaromativorans: JI59_16765
Entry
JI59_16765        CDS       T03399                                 
Name
(GenBank) pseudouridine synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
npn  Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:npn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:npn03009]
    JI59_16765
Enzymes [BR:npn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     JI59_16765
Ribosome biogenesis [BR:npn03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    JI59_16765
SSDB
Motif
Pfam: PseudoU_synth_2 S4 YuA_Gp49
Other DBs
NCBI-ProteinID: AIT81314
Position
complement(3446333..3447595)
AA seq 420 aa
MSRPENNDIVRQFTVGADDEGVRLDRWFKRHLPQVGFATVSRWARTGQIRVDGKRADVAD
RLSAGQVLRVPPGGEVKPGGKPARTRRELTEEELELADSMVLTQDRAAIVLNKPPGLATQ
GGSGMKQHVDGLLDAYAPDGPRPRLVHRLDKDTSGVLLIARTPGSAAFFSKRFSGRSARK
IYWALVVGVPSISDGMIELPLAKQPGTGGEKMHVDEEGGQPARTRYRVLDRAGNRAAWVE
LHPLTGRTHQLRVHMAAIGHPIVGDGKYGGQDAFLTGTISRKMHLHARRLIIDHPDGAPL
DVTAPLPEHFANSLEQLGFDEADGAELPEAPPEPGKDEQKRAAKAHSKQYRKERRGERRS
RGDGPPPRGGKPGARSGKPARPGGKPARPGGKPGPGKPAGGRPTGGRSGAKKPGGPRGKR
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgagtcgccccgaaaataacgacattgtccgccagttcaccgtcggcgccgacgatgaa
ggcgtccgccttgaccgctggttcaagcggcacctgccgcaagtcggcttcgccaccgta
tcgcgctgggcccgcaccgggcagatccgcgtcgacggcaagcgcgccgacgtcgccgac
cggctgagcgccggacaggtcctgcgcgtccccccgggcggcgaggtcaagccgggcggc
aagccagcccgcacccgccgcgagctgaccgaggaagaactggaactcgccgattcgatg
gtcctcacgcaggaccgcgcggccatcgtgctcaacaagcccccgggccttgccacgcag
ggcggctcgggcatgaagcagcacgtcgacggcctgctcgacgcctatgcgcctgacggc
ccgcgtccccgcctcgtccaccggctcgacaaggacacctccggcgtcctgctgatcgcc
cgcaccccgggcagcgccgcgttcttctccaagcgcttctccggccgttcggcgaggaag
atctactgggctctcgtggtcggcgtgcccagcatctcggacggcatgatcgaactcccc
cttgccaaacagccgggcaccggcggcgagaagatgcacgtcgacgaggaagggggccag
cccgcgcgcacccgctaccgcgtgctcgaccgcgccggcaaccgcgccgcgtgggtggaa
ctgcatcctctgaccggccgcacccaccagctgcgcgtgcacatggcggcaatcgggcac
ccgatcgtcggcgacggcaagtacggcgggcaggacgccttcctgaccggcacgatcagc
cgcaagatgcacctgcacgcgcgccgcctgatcatcgaccatcccgacggcgccccgctc
gacgtgaccgcgccgctgcccgagcatttcgccaattcgttggagcagctcggcttcgat
gaggccgacggcgccgaactgcccgaagctccgcccgagccgggcaaggacgagcagaag
cgcgcggccaaggcccactccaagcagtaccgcaaggaacggcgcggagagcggcgctca
cgcggggacggcccgccgccgcgcggcggcaaaccgggtgcgcgctcgggcaagcccgcc
cgccccggcggcaaacctgcgcggcccggcggaaagcccggccccggcaagcctgccggt
ggacggccgacgggaggccggagcggcgcgaagaagcccggcggcccgcgaggcaagcgg
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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