KEGG T03399: JI59

Novosphingobium pentaromativorans: JI59_17055

Entry

JI59_17055        CDS       T03399

Name

(GenBank) 3-phosphoglycerate dehydrogenase

K00058

D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]

Organism

npn Novosphingobium pentaromativorans

Pathway

npn00260

Glycine, serine and threonine metabolism

npn00270

Cysteine and methionine metabolism

npn00680

Methane metabolism

npn01100

Metabolic pathways

npn01110

Biosynthesis of secondary metabolites

npn01120

Microbial metabolism in diverse environments

npn01200

Carbon metabolism

npn01230

Biosynthesis of amino acids

Module

npn_M00020

Serine biosynthesis, glycerate-3P => serine

Brite

KEGG Orthology (KO) [BR:npn00001]
09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    JI59_17055
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JI59_17055
   00270 Cysteine and methionine metabolism
    JI59_17055
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:npn04147]
    JI59_17055
Enzymes [BR:npn01000]
1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     JI59_17055
    1.1.1.399  2-oxoglutarate reductase
     JI59_17055
Exosome [BR:npn04147]
Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   JI59_17055

SSDB

Motif

Pfam:

2-Hacid_dh_C PGDH_inter 2-Hacid_dh ACT NAD_binding_2 UPF0020 IlvN F420_oxidored

Other DBs

NCBI-ProteinID:

AIT81371

Position

3508668..3510254

AA seq 528 aa
MTTKPKVLISDKMDPNAARIFEIRGCDVDVITGETPEQLIARIGDYDGLAIRSSTKVTKE
VLAAAKNLKVIGRAGIGVDNVDIPAASSQGVVVMNTPFGNSITTAEHAIALMFALARQLP
EANAQTQQGLWPKNGFMGVEVTGKTLGLIGAGNIGSIVASRALGLKMKVAAFDPFLTPER
AVEMGVEKVDLDTLLERADFITLHTPLTDQTRNILSRENLAKTKKGVRIINCARGGLVDE
QALKDLLDSGHIAGAALDVFVTEPAKESPLFGTPNFICTPHLGASTNEAQVNVALQVAEQ
MADYLVNGGVTNALNMPSLSAEEAPKLKPYMALAEQLGSLVGQLTHDSVPRISIHTEGAA
AELNMKPIAAAVLAGFLRVQSDSVNMVNAPYLAKERGLEVREVKTEREGDYHTLIRVSVK
TEAGERSVAGTLFNNVEPRLVELFGIKVEAELAGHMMYIVNQDAPGFIGRIGSLLGENEI
NIGTFNLGRREAGGEAVLLLSVDSAVPEGVLKQACEVPGVRMVKALSF

NT seq 1587 nt +upstreamnt +downstreamnt
atgaccaccaagcccaaagtcctcatttccgacaagatggaccccaatgccgcgcgcatc
ttcgagatccgcggttgcgacgtcgacgtgatcaccggcgaaacgccggaacagctcatc
gcccgtatcggcgactacgatggccttgccatccgttcctcgaccaaggtcaccaaggaa
gtgctcgccgcggcgaagaacctcaaggtgatcggccgcgccggcatcggcgtcgacaac
gtcgacatcccggctgcttcgtcgcagggcgtcgtcgtgatgaacacgcccttcggcaac
tcgatcaccacggccgaacacgccatcgccctgatgttcgcgctggcccgccagctgcct
gaagccaatgcccagacccagcaggggctgtggccgaagaacggcttcatgggcgttgaa
gtcaccggcaagaccctcggcctcatcggcgcgggcaacatcggctcgatcgtcgccagc
cgcgcgctgggcctgaagatgaaggtagccgccttcgacccgttcctcacgcctgagcgc
gcggtggaaatgggcgtcgagaaggtcgacctcgatacgctgctcgagcgtgccgacttc
atcacgctgcatacgccgctgaccgaccagacccgcaacatcctgagccgcgagaacctc
gccaagaccaagaagggtgtgcgcatcatcaactgtgcgcgcggcggcctggtcgacgag
caagcgctcaaggacctgctcgactccggccatatcgccggtgcggctctcgacgtgttc
gtcaccgagccggccaaggaatcgccgctgttcggtaccccgaacttcatctgcaccccg
cacctcggtgcttcgaccaacgaagcgcaggtcaacgtggcgctgcaggtggccgagcag
atggccgactacctcgtcaacggcggcgtcaccaacgcgctgaacatgccgtcgctctcg
gccgaggaagcgcccaagctcaagccctacatggcgcttgccgaacagctgggcagcctc
gtcggccagctcacgcatgactcggttccgcggatctcgatccacaccgagggcgctgca
gccgaactgaacatgaagccgattgcagccgccgtgcttgccggcttcctgcgtgtccag
tcggactcggtaaacatggtcaacgccccgtacctcgccaaggagcgcggtctggaagtg
cgtgaggtcaagaccgagcgcgaaggcgactaccacaccttgatccgcgtctcggtgaag
accgaagcgggcgagcgttcggtggccggcacgctgttcaacaacgtcgagccgcgtctg
gtcgaactgttcgggatcaaggtcgaagccgaactggccggtcacatgatgtacatcgtc
aaccaggacgcaccgggcttcatcggccgcatcggttcgctgctgggtgaaaacgagatc
aacatcggcacgttcaacctcggacgccgtgaagccggcggcgaggccgtgcttcttctc
tcggtcgacagcgctgtgcctgaaggcgtgctcaagcaggcctgcgaagtgccgggcgtg
cgcatggtgaaggcgctctcgttctga

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