KEGG   Novosphingobium pentaromativorans: JI59_24545
Entry
JI59_24545        CDS       T03399                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
npn  Novosphingobium pentaromativorans
Pathway
npn00250  Alanine, aspartate and glutamate metabolism
npn00310  Lysine degradation
npn00350  Tyrosine metabolism
npn00650  Butanoate metabolism
npn00760  Nicotinate and nicotinamide metabolism
npn01100  Metabolic pathways
npn01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:npn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    JI59_24545 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    JI59_24545 (gabD)
   00310 Lysine degradation
    JI59_24545 (gabD)
   00350 Tyrosine metabolism
    JI59_24545 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    JI59_24545 (gabD)
Enzymes [BR:npn01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     JI59_24545 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     JI59_24545 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     JI59_24545 (gabD)
SSDB
Motif
Pfam: Aldedh XFP_N
Other DBs
NCBI-ProteinID: AIT82627
UniProt: G6EL38
Position
pLA1:complement(22250..23749)
AA seq 499 aa
MPVSHPFLSRPEFAEGLPVVDGEAIATAERAIAVINPATGMALTEIPLLGAVEANRAVES
NARAFGEWRAHSAAERAAILHAWFALVRENRNDLAMLLTAEQGKPLAEALGEIDYAASFI
QWFAEEARRINGEIIPAQRDRRVLVLKQPVGLVGAITPWNFPAAMITRKVAPALAAGCTV
TLKPAELTPLTAFALARLALEAGVPAGAFNVIAGDAPAIGSVLTSHPGVAKFTFTGSTAV
GKLLTAQCATTLKRVSMELGGNAPLIVFDDADIDVAVAGTIASKFRNTGQTCVCANRILV
QNGIHDRFAEALAARVAAFRVGNGLEGETDQGPLITAAALHKVREHVGDAVGRGARIVTG
GEGHEAGELFHQPTVLTGANPDMRLALEETFGPVAPLFRFETEAEALTLANSTRSGLAAY
AFTRDMDRFWRLAERLEVGMVGFNNGIISSETMPFGGVKESGLGREGSRHGIDEFLELKA
ISLGLPPQPAIEAEKPRRT
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgcctgtttcccacccattcttgtcccggccagaattcgctgaaggcctgccggtcgtc
gatggcgaggccatagccactgccgagcgggcgattgccgtgatcaatcctgcgacgggg
atggcgctgacggaaatccccctcctgggtgcggtcgaggcgaaccgcgccgtcgaaagc
aacgccagagccttcggggaatggcgggcccattcggccgccgaacgcgccgccattctg
cacgcatggttcgcgctcgttcgcgaaaaccgcaacgatctggcaatgctgctcacggcc
gagcagggcaagccgctggccgaagcgctgggcgagatcgactatgcggccagcttcatc
caatggttcgcggaagaagcccggcgcatcaatggcgagatcatccccgcccagcgcgat
cgccgggtcctggttctcaagcagccggtgggcctggtcggcgcgattacgccatggaat
tttcccgcggcgatgatcacgcgcaaggtcgcgcccgccctggcagcggggtgcacggtt
acgctcaaacccgccgaactcaccccgctcacggccttcgcgctggcccggctggcgctc
gaggcgggtgttccggcaggcgctttcaatgtcatcgccggcgatgcgccggcgatcggg
tcggtcctgaccagccatcccggcgttgccaaattcaccttcaccggctccaccgcggtt
ggcaagctgttgaccgcgcagtgcgcgacgacgctcaagcgggtgtcgatggagctgggc
ggcaacgctccgctgatcgtgttcgacgatgccgatatcgatgtcgccgtggcgggcacg
atcgcttcaaagttccgaaacaccggccagacctgcgtctgcgccaaccgcatcctggtg
cagaacggcatccatgaccggttcgccgaagcgctggccgccagagtcgcggctttccgc
gtcggcaacggcctggaaggcgagaccgatcaaggaccgctgatcaccgccgcagcattg
cacaaggtgcgcgaacatgtcggcgatgccgtggggcgcggcgcccgaatcgtcactgga
ggcgaagggcatgaagccggcgagctgttccaccagcccacggtcctgaccggcgccaac
cccgacatgcggctggcgctggaagagaccttcggaccggtcgctcccctcttccgcttc
gaaaccgaggccgaagccctgaccctggccaacagcacccgctcgggcctggccgcctac
gcattcacccgcgacatggaccggttctggcgccttgccgaaagactcgaggttggcatg
gtcggcttcaacaacggcatcatttcttcggaaaccatgcctttcggcggggtcaaggaa
tcgggactggggcgcgagggatcgcgtcacgggatcgacgaattcctggaactcaaggcc
ataagtctcggcttgccgccgcagcctgcgattgaagcggagaagccccgaaggacatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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