KEGG   Novosphingobium sp. PP1Y: PP1Y_AT24310
Entry
PP1Y_AT24310      CDS       T01515                                 
Name
(GenBank) DNA transfer and F pilus assembly protein
  KO
K12056  conjugal transfer mating pair stabilization protein TraG
Organism
npp  Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:npp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_AT24310
Secretion system [BR:npp02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   PP1Y_AT24310
SSDB
Motif
Pfam: TraG_N
Other DBs
NCBI-ProteinID: CCA93224
UniProt: F6IP72
Position
complement(2547756..2551496)
AA seq 1246 aa
MRLAFRALPALLLAFAATPALAVDTSFYTYDGFGETVDAFRMVSLIFADPRYETLVMIIA
VAGIALGAVIASVRGSGMGLVAFGFQILVGVGLFVGLVSTTGTVHVYDKVRNAYQPVGGV
PNLLVLVAGVTNLMERSLAEAIDDNTIDPGAKLEFGAGGHSFDLFLNAVSPRGPMTDSFL
DATIKDYVRQCYPVARVSPAYGVDDDQLFRTTTDLPASFAAMAGPATFSTVYTAADKGGT
TVSCQEAWDNIRSRLAEPTLFDGYTTQVCQRTGYDVTNPSQLARCRSHLGEMGQIMMGTP
LSLQTFMTDILLGNTVGDVLFEDSPASAARVMANRAIVSNGLATMSVANEWLPTIRATVF
GIMLFMVPIALLFILTPINLRVASFALGLFVFVALWGVIDAGIYQLTLGRAMDVLAEMRS
NAVAANAWMLAPSSAMKALAIFGTFRTAAAGLAGAFVFTVFRFSGNVFTSFTGSALQAQG
LGTAAAAPLATREGYASALESQASAAGTMARRSAASSFGDFGERATFGANRAFGAASGVL
GEQGGGVPGVPAFGMGGIDAARELGGLAPVLNGKDLSDPTVARAVRANAITAAIHNFAER
DALRGLGTGYFGSGQAGEKAFASFAQNMVQWKAFGDERAYAMMFQGAARHFERGGYSKAD
AELKASGVIGDAGADPTFAKLIANTYDQEQMLRNDLTGAEVQVGAMEGRRDYAGDRVSET
ERRNVATEQAWRTGGNEGQRSAAGMLGLSLDETSRRTSFINALSGEARSSAISQLSRSTG
RNEAQVVRALETYNAAVQLGTADGATAEAGREGTSIYGRTREAAGYDFAERTGKLDAQRE
AGTGGTRSAARIGEERRQSENFGFAEGAAAAGISTREAARLDSFIQALSRTAGNQTDMAE
GGAGGIADRARNERMTRIVDNERLTRMQGLLREHGINLTKRQIAMDQNGDLNLNVTPETA
AQMWKGGLINESQLGAVANGGSARFSFAHNDLLVSSSTGFQRSARSDTSTRFEAGKQAGP
DTIESFMGGGKEGQAAMANWLRGGFEMDRRGNWRLKPQVADTLQRDVQAIMAQTGWTRNI
ARRAEDSTSMGTDAGASISASASRAAPAKARPNAGKQSGSSVAGGAGVNLGFESSDRGTT
SETANANIDIVNYDVREAIAAAERAASRSDSPADAFSRALSRQILGPSGLRNRYLEQADS
GRGTADVTGPLTSIEQSSVLKTGRFSDDLANGPFDGDPTFKERRDK
NT seq 3741 nt   +upstreamnt  +downstreamnt
atgcgcctggccttccgcgcccttcccgccctgctgctggctttcgccgcgacacccgcc
ctggcggtcgataccagcttctatacctatgacggcttcggcgagacggtggacgcattc
cgcatggtctccctgatcttcgccgacccgcgctacgagacgctggtgatgatcatcgcg
gtggccggcatcgcacttggtgcggtgatcgccagcgtgcgcggctccggcatggggctc
gtcgccttcggcttccagatcctcgtcggggtcggcctcttcgtcgggctcgtctcgacc
acgggcacggtccatgtctacgacaaggtccgaaacgcctatcagccggtcggcggggtg
cccaatcttctcgtgctggtcgccggcgtcaccaatctcatggaacgctcgctcgccgag
gcgatcgacgacaatacgatcgatccgggcgccaagctggaattcggcgcgggcggacac
agcttcgacttgttcctgaacgccgtctcgccgcgcggcccgatgaccgacagtttcctg
gacgcgacgatcaaggactatgtgcggcaatgctatcccgtcgcgcgggtctcgcccgcc
tatggcgtggacgacgaccagttgttccggaccaccaccgacctgcccgcttccttcgcg
gcgatggcgggccccgctaccttcagcaccgtctacaccgcagccgacaagggcggcacc
accgtcagttgccaggaggcctgggacaatatccggtcgcgcctcgccgagcccacgctg
ttcgatggctacacgacacaggtctgccagcgcacaggctatgacgttaccaatccgtcc
caactcgcgcgctgccgctcacaccttggcgagatgggccagatcatgatgggaacgccg
ctctcactgcagacgttcatgaccgatatattgctcggaaacacggttggcgacgtgctg
ttcgaggacagcccggcctcggcggcgcgggtcatggcaaaccgggcgatcgtctccaac
ggacttgccaccatgtcggtcgccaacgaatggctgccgacgatccgcgcgaccgtgttc
ggcatcatgctgttcatggtgccgatcgcgctgctgttcatcctcaccccgatcaacttg
cgcgtcgcgagcttcgcgctgggactcttcgtcttcgtcgcgctctggggcgtcatcgat
gccggcatctaccagctgacgctgggtcgggcgatggacgtgctcgccgagatgcgctcg
aacgcggtggcggccaatgcctggatgcttgcaccctcctcggcgatgaaggcgctggcg
atcttcggaaccttccgcacggcagccgccggcctcgccggcgccttcgtcttcaccgtg
ttccgcttttcgggcaatgtcttcaccagcttcaccggcagcgcgctgcaggcgcagggg
ctcggcaccgccgccgccgcgccgctcgccacgcgcgagggctacgcctccgcgctggaa
tcgcaggcttccgccgcgggtacgatggcaaggcgtagcgcggcatcgagcttcggcgac
tttggcgagcgcgcgaccttcggtgccaaccgcgcattcggggcagcttctggcgtactc
ggcgaacaaggcggcggtgtaccgggcgttccggccttcggcatgggcgggatcgatgcc
gcgcgcgagctcggcgggcttgcccctgtgctcaatggcaaagatttgagcgatccaact
gtcgcgcgcgccgtgcgcgccaatgccatcacggcggcgatccacaattttgccgaaagg
gatgccctgcgtggcttgggcactggctattttggttcgggtcaggccggagagaaggcc
tttgcctctttcgcgcagaacatggtgcagtggaaagcgttcggcgacgagcgcgcctat
gcgatgatgttccagggcgccgcgcggcactttgagcgcggcggctattcgaaggcggat
gccgagctgaaggcgtcgggggtgatcggtgacgctggcgccgatccgaccttcgccaag
ctcatcgccaacacttacgatcaggagcagatgctcaggaacgacctcaccggggctgag
gtccaggtcggagcgatggaagggcgccgagactatgccggggaccgtgtttccgagacc
gagcggcgcaatgtcgcaaccgaacaggcctggcgcacgggcggtaatgaggggcagcgc
agtgcagccggtatgctcggtttgtcactcgacgagacaagccggcgcacctcgttcatc
aatgcactctcgggcgaggcacgctcgtcggccatttcgcagctctcccgctcgacaggg
cgcaacgaagcacaggtcgtgcgagccctcgaaacctacaatgccgcggttcagctcggc
accgccgatggcgcgaccgccgaagcaggccgcgaaggcaccagcatctatggccgcaca
cgtgaggcggcgggctatgattttgctgagcgtacaggcaagcttgacgcccagcgcgag
gcgggaaccggcggcacgcgcagcgccgcgcgcatcggcgaggagcgccgccagtcggag
aacttcggctttgccgagggtgcggctgcggccgggatttcgacacgggaagccgcgcgg
cttgacagcttcatccaggcgctgagccgcacggccggcaaccagaccgacatggctgaa
gggggagccggtgggatcgccgatcgtgcgcgcaatgagcgcatgacccgcattgtcgac
aacgagcgcttgacccgcatgcagggtctgctccgcgagcacggcattaatctcaccaag
cgccagatcgcgatggaccagaatggtgatctcaatctcaacgtcaccccggaaaccgcc
gcgcaaatgtggaaaggtggtctcatcaacgagagtcaattgggcgccgtcgccaatggc
gggtcagcgcggttcagcttcgctcacaacgatctgctggtatcgagcagcacgggtttc
cagcgttcggcgcggagcgacaccagcacgcggttcgaggcgggcaagcaggccggaccc
gacacgatcgagagcttcatgggcggtggcaaggaaggccaagccgccatggcgaattgg
ctgcgcggcgggttcgaaatggatcggcgcggcaactggcgattgaagcctcaggtcgcc
gacacgctgcagcgcgatgttcaggcgatcatggcgcagaccgggtggacgcgaaatatc
gcacggcgcgcggaagacagcacatcgatgggaacggatgccggtgcttcaatatctgcg
tctgccagtcgtgccgctcccgccaaggcaaggcctaatgcagggaagcaatcgggcagt
tctgtagccggcggggctggggtaaacttgggttttgaaagctccgatcgcgggaccact
tcggaaaccgccaacgccaatatcgacatcgtgaactacgacgtgcgtgaagcgattgcc
gcagcggagcgagcggcctcgcgctccgacagtccggcggatgcgttctcgcgcgcgttg
agtcgtcaaattctgggaccgagcggactgcgcaatcgctatctggaacaggctgattca
ggtcgtggtactgcagacgtcactggaccgctgacgtcaatcgaacaatcatccgttctc
aagaccggacggttctcagatgatttggcaaacggtccgtttgacggtgatccgaccttc
aaggaacgtcgcgacaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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