KEGG   Novosphingobium sp. PP1Y: PP1Y_AT27149
Entry
PP1Y_AT27149      CDS       T01515                                 
Name
(GenBank) competence protein ComEC
  KO
K02238  competence protein ComEC
Organism
npp  Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:npp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_AT27149
Secretion system [BR:npp02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   PP1Y_AT27149
SSDB
Motif
Pfam: Competence DUF4131
Other DBs
NCBI-ProteinID: CCA93492
UniProt: F6IPZ0
Position
complement(2850748..2852937)
AA seq 729 aa
MASQAKARDENNASRGLAGGAALQHRPWNSKSELSRVLAGLERFLSVAGFDRGPWLVVSF
GAGIAAWFGLPGPFHWAGCVVGSSAMAAFAAWIWPDRERFPHMRVAACAVFLMFLAGCLT
VWSKSALVGQDAIDRPVSGMFLGKVLGVEEQPAEQRVRWIVATREPGSGRSIKVRLNVPD
DLGVASVSSGAVIRFEARLMPPAPPMFPGGYNFARTAWFSGLAASGSVNGKVEILRLGGK
GDMLESTRSALSRHVRARMSGPESGIAAALASGDRGGIAENDAQAMRDAGLAHLLAISGL
HVSAVIGAAYFLSLRLLALSPALALRFRLPVVAALCGALSGIAYTLLTGSQVPTVRSCIG
AMLVLVALALGREAISLRLLAVAGFAVLLLWPESLTGPSFQMSFAAVLAIVALATSGPVR
RFLAPREESWLSRLMRQAAMLFVTGFVIELVLMPIGFYHFHRAGAYGALANVLAIPLTTF
AVMPCIALALLCDIVGLGGPFWWLAGQFIDLLLGLAHTISALPGAVSVLPAMGTGGFLLF
VTGGLWLGLWSGRVRLLGLVPACFGIVWLILLEPPDILVTGDGRHVGLLDDSGDGLVTLR
DTGSDYVRDNLREFAGIEGELTPLASWPGSRCNRDFCSVRIDRAGRSWDLLIARGRDQVP
ERSLAAACDKADIVIADRWLPWSCKPRWLKADRTMLDRTGGLAIRLRGRSVETVAAGQGR
HGWWKPRGP
NT seq 2190 nt   +upstreamnt  +downstreamnt
atggccagccaagccaaagcccgagatgaaaataacgcaagccgcggcctcgccgggggc
gctgcattgcagcatcggccatggaacagcaagagcgagttgtcgagggttttggcgggc
ctggagcgatttctttctgttgctggcttcgatcgcgggccttggctggtcgtctcattc
ggcgcgggaatcgcggcgtggttcggccttcccggaccgttccattgggccggatgtgtc
gtcggaagcagtgccatggcagctttcgcggcgtggatctggccggatcgtgagcgcttt
ccccacatgcgagtggcagcctgcgcagtttttctcatgtttctcgccggttgcctgacg
gtgtggagcaaatcggcgctggtgggacaggacgcaatcgatcgcccggtctcgggaatg
ttccttggaaaagtgctaggtgttgaagaacagcccgccgaacagcgggtcagatggatc
gtcgcaacgcgggaaccgggctcggggcggtcgataaaggttcggcttaatgttcccgac
gatctgggcgttgcatccgtttcgtcaggggcggtgattcgctttgaggcgcggttgatg
ccgccggctccgccgatgtttccaggtgggtataattttgcgcgcaccgcgtggttctcc
ggccttgctgcaagtgggagcgtcaacggcaaagtcgagatcctcaggttgggcggcaag
ggcgatatgctcgaatctacgcgtagcgcgctttcccgacatgtccgtgcgcggatgagc
ggtccggaaagcgggattgccgcggctctggcgagcggggaccgcggaggcattgcagag
aacgatgcgcaggcgatgcgcgatgctggtcttgcgcatctcctggcgatcagcggtctt
cacgtcagcgcggtaatcggggctgcctattttctctcgttgcggttgctcgcgctttcg
cccgcgctggccttgcggttccggctcccggtggtggcggcgctgtgcggtgctctgtcc
gggattgcctataccctgttgacgggctcgcaagtgccgacggtccgttcctgcatcggg
gcgatgctcgtgcttgtcgcgctggcgctggggcgcgaggcaatctcgcttcggcttctg
gctgtcgccgggttcgcggtcctgctgctctggcccgaatcgctgacagggccaagcttc
cagatgagctttgcggccgtacttgcgattgtggcgctggcgaccagcgggccggttcgc
cggttcctggcaccgcgagaggaatcgtggctttcgcggcttatgcggcaagcagcaatg
ctgttcgtaacgggcttcgtcatcgaactcgtcctcatgccgatcggcttctaccatttc
catcgcgccggagcttatggtgcgctggccaatgtgcttgccatcccgctcacgactttc
gcggtcatgccctgcattgccctcgcgctgctgtgcgacattgtgggactgggcgggccg
ttctggtggctggcggggcagttcatcgacctactgctgggcctcgcgcacacgatcagt
gcgctgcccggcgccgtttcggttttgcctgccatggggacgggcggcttccttctgttc
gtaaccggcggcctgtggctgggcctgtggagcgggcgcgtgcggctgctgggactggtg
ccagcctgtttcggtatcgtctggctcatcctgctcgagccgccggacattctcgtgacc
ggcgatggccgtcatgtcggactgctcgacgatagcggcgatgggctcgtcaccttgcgc
gacaccggcagcgattatgtgcgcgacaatcttcgcgaattcgcagggatcgaaggcgaa
ttgacgccgctcgcatcgtggccgggttcgagatgcaatcgcgacttctgttcggtacgg
atcgatcgagccggtcgatcgtgggacttgctgatcgccagaggccgcgaccaggtgccc
gagcggtcgctggcagcggcctgcgacaaggccgatatcgtcattgccgaccgctggctg
ccatggagctgcaagccgcgctggctcaaggccgaccggaccatgctggacaggaccggc
gggcttgccatcaggctgcgcggcagatccgtcgaaaccgtggcggcagggcagggccgc
catggctggtggaaaccgcgcgggccgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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