KEGG   Novosphingobium sp. PP1Y: PP1Y_AT2717
Entry
PP1Y_AT2717       CDS       T01515                                 
Name
(GenBank) conjugal transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:npp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PP1Y_AT2717
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_AT2717
Secretion system [BR:npp02044]
 Type IV secretion system
  Trb secretion system protein
   PP1Y_AT2717
SSDB
Motif
Pfam: DUF4141 Sema PSD13_N DUF948 DUF7653 BORCS6 RuvC HAUS6_N HAUS-augmin3
Other DBs
NCBI-ProteinID: CCA91240
UniProt: F6IGH4
Position
287295..288014
AA seq 239 aa
MKIPVLRRALMATAIATSLVSGTMIAAPAQAQFGGIVYDPSNYAQNVLTAARTLQQINNQ
IQQIQNQATSLINEARNLTSLPVSTIQTLQQQVDQTRQLLNQAQRIAYDVTDVQQVFNGR
YKGAALTGGQAQMVANANARWQDSVGAFEDAMKVQAGIVGNLGATRSSITTLVGASQSAT
GALQAAQAGNQLLALQTQQLADLTAAIAAQGRAQSIEAARNAATEAEGRERFRRFRTRN
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaaaatacccgtcctccgccgcgctctcatggcgacggcgatcgccacttcgctggtt
tcaggcaccatgatcgccgcgccagcgcaggcccagtttggcgggatcgtctatgatccc
agcaactacgcgcagaacgtgctgaccgccgcccggacgctgcagcagatcaacaaccag
atccagcagatccagaaccaggcgaccagcctcatcaacgaggcccgcaatcttaccagt
ctgccggtctcgacgatccagacgcttcagcaacaggtcgaccagacccgccagttgctg
aaccaggcccagcgcatcgcctatgacgtgaccgacgtgcagcaggtgttcaacggccgt
tacaagggggcggcactgaccggcgggcaagcccagatggtcgctaacgccaatgcgcgc
tggcaggacagcgtcggcgccttcgaagacgcaatgaaggtgcaggcggggatcgtcggc
aatctgggtgcgacccgcagctcgatcacgacactggtcggcgctagccaatcagcgacc
ggggctttgcaggcggcacaggccggcaatcagctactggctttgcaaacccagcagctg
gccgatctgactgccgccattgcggcgcagggccgcgcacagtcgatcgaggccgcgcgc
aatgccgcgaccgaggccgagggccgcgagcgtttccgccgcttccggacccggaactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (12)   

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