KEGG   Novosphingobium sp. PP1Y: PP1Y_AT35400
Entry
PP1Y_AT35400      CDS       T01515                                 
Name
(GenBank) pseudouridylate synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
npp  Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:npp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:npp03009]
    PP1Y_AT35400
   03016 Transfer RNA biogenesis [BR:npp03016]
    PP1Y_AT35400
Enzymes [BR:npp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     PP1Y_AT35400
    5.4.99.29  23S rRNA pseudouridine746 synthase
     PP1Y_AT35400
Ribosome biogenesis [BR:npp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PP1Y_AT35400
Transfer RNA biogenesis [BR:npp03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    PP1Y_AT35400
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: CCA94253
UniProt: F6IJJ9
Position
3718120..3718818
AA seq 232 aa
MELEILFEDGEALVIDKPAGLPLDRPRAGGVSLDDYIDTLKLGFQREPAPVHRLDRDTSG
CLLLARNPKALKRFAAAFEERLVEKRYLGIVTGVPAEDEGTIALSLSKVSTAKDGWRMIP
ARKGKPAVTHWRKLDTRDGLTLIEFRPETGRTHQIRVHAASGLGMPLLGDPVYGTKKAGA
RTMLHAAALTVPRGEKAPIVAIAPLPADFAALGFVDPGFEDSGSEDLSPADD
NT seq 699 nt   +upstreamnt  +downstreamnt
atggaactggaaattctcttcgaagacggcgaagcgctcgtcatcgacaagcctgcaggc
ctgccgctcgaccgcccccgggccggcggggtgagccttgacgactatatcgacacgctc
aagctgggcttccagcgtgagcccgcgcccgttcaccgcctcgaccgcgacacctccggc
tgcctgctgctggcccgcaatcccaaggcgctcaagcgctttgccgcggcgttcgaggag
cgcctcgtcgaaaagcgctatctcggcatcgtgaccggtgttccggccgaggacgagggc
acgatcgccctgtcgctgtccaaggtgagcacggccaaggacggctggcgcatgatcccg
gcgcgcaagggcaagcccgcggtgacgcactggcgcaagctcgacacgcgcgacggcctg
acgcttatcgaattccgccccgaaaccggccggacccaccagatccgcgtgcatgccgca
tcaggcctcggcatgccgctgctcggcgatccggtctatgggacgaagaaggccggggca
cggaccatgcttcatgccgccgccctcaccgttccgcgcggcgagaaagcccccatcgtc
gccatcgccccgcttcccgcagacttcgccgccctcggtttcgtcgaccccggctttgaa
gactccggctccgaagacctcagccctgccgatgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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