KEGG   Novosphingobium sp. PP1Y: PP1Y_AT9058
Entry
PP1Y_AT9058       CDS       T01515                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:npp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PP1Y_AT9058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npp03400]
    PP1Y_AT9058
Enzymes [BR:npp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     PP1Y_AT9058
DNA repair and recombination proteins [BR:npp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     PP1Y_AT9058
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: CCA91846
UniProt: F6IK28
Position
972279..973070
AA seq 263 aa
MLKIATWNINSVRLRIDQVERFLTEQTPDVLCLQEIKVAKHLFPHEMFERLGYTHRAIHG
QKGYHGVATVSRVPFEEYSRHDWQDNGEARHVGVELQGQGKGLILENVYIPAGGDVADRE
VNPKFGQKLDFLARMTAWADKIDRPTLIVGDFNIAPLECDVYDHKALLKVVSHTPIEVET
LGRFQDAHGWVDLGRKFIPAPERNYSWWSYRSYWRNKDQGRRLDHMWASPDLAGQATAHR
FVEETRKWEQPSDHVPLITEFDL
NT seq 792 nt   +upstreamnt  +downstreamnt
atgctcaagattgccacctggaacatcaattcagtccgccttcgcatcgatcaggtcgag
cgcttcctgaccgaacagacgcccgacgtcctgtgcctgcaagagatcaaggtcgccaag
cacctcttcccgcacgagatgttcgagcggctgggctatacgcaccgcgcgatccacggc
cagaagggctaccacggcgtcgccacggtcagccgcgtgccgttcgaggagtacagccgc
cacgactggcaggacaatggcgaggcccgccacgtcggcgtggaactgcaggggcagggc
aagggcctgatcctcgagaacgtctatattccggcaggcggtgacgtggctgaccgcgag
gtcaatcccaagttcggccagaagctggactttcttgcccgcatgaccgcgtgggcggac
aagatcgaccgcccgacactgatcgtgggcgacttcaacatcgccccgctcgaatgcgat
gtctatgatcacaaggcgctgctcaaggtcgtcagccacacgccgatcgaggtggagacg
cttggccgcttccaggatgcgcacggctgggtcgacctgggccgcaagttcattcctgca
ccggagcgcaattactcctggtggtcctatcgcagctactggcgcaacaaggaccagggc
cgccgtcttgaccacatgtgggcctctccggacctggccgggcaggccacggcgcatcgt
ttcgtcgaggaaacgcgcaagtgggaacagcccagcgaccacgtgccgctgatcacggag
ttcgacctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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