KEGG   Novosphingobium sp. PP1Y: PP1Y_Lpl465
Entry
PP1Y_Lpl465       CDS       T01515                                 
Name
(GenBank) conjugal transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:npp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PP1Y_Lpl465
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_Lpl465
Secretion system [BR:npp02044]
 Type IV secretion system
  Trb secretion system protein
   PP1Y_Lpl465
SSDB
Motif
Pfam: Filament DUF4141 DUF2452 DUF5929 DUF948
Other DBs
NCBI-ProteinID: CCA89852
UniProt: F6IC27
Position
Lpl:complement(40017..40739)
AA seq 240 aa
MTRTRLRHAVMAGTFVSMITASCVTAPPAHALFGFGDVVYDPTNYAQNVLTAVRSLEQIN
NQIRQIQNQATSLLNEARNLESLPTSTLSTLRAQVQQTQSLLARAQRVAFNVETIQQAFA
DRYKGDALSGSDTQMVANADARWNDSVAAFEDALTVQAGIVGNIDGARSSINTLVTASQS
AAGALQAAQAGNQLLALQSQQLADLSAAVVAQGRAQTLEAANDAATEAEGRQRFRRFRGQ
NT seq 723 nt   +upstreamnt  +downstreamnt
atgacccgaacccgcctgcgccacgccgtgatggccggaactttcgtatccatgataacg
gcaagctgcgtgactgccccgccagcccatgcgctgttcgggttcggggacgtcgtctac
gatcccaccaattacgcgcaaaacgtgctgacggccgtacgctcgcttgagcagatcaac
aaccagatccgccagatccagaaccaggcaacatcgctgctcaacgaagcgagaaacctg
gaaagcctgccaacctcgacactttcaactttgcgggcccaggtgcagcaaacccagagc
ctgcttgcccgggcccagcgcgttgccttcaatgtcgagactatccagcaggcctttgcc
gatcgctacaagggagatgcgctaagcggcagtgacacccaaatggtcgccaatgccgat
gcgcgctggaacgacagcgttgctgcattcgaagatgcgctgaccgttcaggctgggatc
gttggtaacatcgatggcgcgcgttcttcgatcaatacgctggtaaccgcaagccagtcg
gcggcaggcgcgctgcaggcggcccaggcgggcaaccagctactcgcgttgcagtcacag
cagcttgccgacctgtccgccgccgttgtggcgcaaggaagagcccagaccctggaagca
gccaacgatgcggcaaccgaggcagaagggcgtcagcgtttccgtcggtttcgcgggcaa
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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