KEGG   Novosphingobium sp. PP1Y: PP1Y_Spl305
Entry
PP1Y_Spl305       CDS       T01515                                 
Name
(GenBank) type IV secretion system protein VirB11
  KO
K03196  type IV secretion system protein VirB11 [EC:7.4.2.8]
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:npp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PP1Y_Spl305
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npp02044]
    PP1Y_Spl305
Enzymes [BR:npp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PP1Y_Spl305
Secretion system [BR:npp02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   PP1Y_Spl305
SSDB
Motif
Pfam: T2SSE ResIII Mg_chelatase FtsK_SpoIIIE AAA_29 DEAD APH AAA_18 nSTAND3 MukB AAA_7 GvpD_P-loop ABC_tran AAA_33 AAA_2 TsaE AAA_22 ATPase Zeta_toxin TrwB_AAD_bind AAA_23 MobB Sigma54_activat DUF87 AAA_19 AAA_14 KAP_NTPase AAA_28 DO-GTPase1 AAA_16 AAA_24 Viral_helicase1 G-alpha PduV-EutP Pox_A32
Other DBs
NCBI-ProteinID: CCA89785
UniProt: F6IBW0
Position
Spl:complement(29804..30820)
AA seq 338 aa
MAHVSTIYQHNAAPLQPLLDREDVTELVINEPGVIGVETRKGWEWHEAPALDHASLMTLA
RLIAGLTKQDISEDYPICSSVLPGGERAQVVIPPAIERGFVSITIRKASNTAMDLGDLDR
SGLFSEVKAHGAANEVDDALLAYRAAGDWNGFFKLAVEARKNILISGATGSGKTTFSKAL
IKLIPDFERVLTIEDTRELVVPQRNRVHMMYSKDGHGLQKAGAKELLESALRMRPDRILL
QELRDGTAFFYLRNVNSGHPGSITTVHANTAEGALEQLTLLVKESEGGNDLDRHDIRALL
RSLVDIVVQMHRLPPSDGRPARYRMTEVWFDPAGKPHD
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggcacacgtctctacgatctaccagcacaatgcagccccgctgcaaccgctcctcgat
cgcgaggacgtgaccgaactggtcatcaacgagccgggcgtgatcggcgtcgaaacccgc
aaggggtgggagtggcatgaagcgcccgcgctcgatcacgccagcctcatgacgctggcc
cgcctcattgcgggcctgaccaagcaggacatcagcgaggactaccccatctgctcctcg
gtcctgccgggcggcgagcgcgcccaggtcgtgatcccgcctgccatcgagcgcggcttc
gtctcgatcacgatccgcaaggcctcgaacacggcgatggatcttggcgacctcgaccgc
tcagggctcttcagcgaagtgaaggcacacggtgccgccaacgaggtcgatgacgccttg
ctggcctaccgggccgcaggcgactggaacggcttcttcaagctcgccgtcgaggcgcgc
aagaacatcctgatttccggggcgaccggctcgggaaagaccactttctccaaagccctc
atcaaattgatccctgacttcgagcgagtgctgacgatcgaggatacccgcgaactggtg
gtcccccagcgcaaccgggttcacatgatgtattccaaggatgggcacggtctgcaaaag
gcgggcgcgaaggaattgctggaatcggcgctgcgcatgcgccccgaccgcatccttctc
caggagctgcgcgacggcaccgccttcttctacctgcgcaacgtcaacagcgggcatccc
ggctcgatcacgaccgtccacgccaacactgccgaaggcgcgctcgagcagctcaccttg
ctcgtcaaggaatccgaaggcggcaacgacctcgaccgccacgacattcgcgcgctgctg
cggtcgctcgtcgacatcgtggtgcagatgcaccgccttccgcccagcgacggccgacct
gcccgctaccggatgaccgaagtatggttcgatccggccggcaaacctcacgactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (35)   
   Pfam (35)   
All databases (52)   

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