KEGG   Nanorana parkeri (Xizang Plateau frog): 108786742
Entry
108786742         CDS       T04897                                 
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03013  Nucleocytoplasmic transport
npr03015  mRNA surveillance pathway
npr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108786742
  09122 Translation
   03013 Nucleocytoplasmic transport
    108786742
   03015 mRNA surveillance pathway
    108786742
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npr03019]
    108786742
   03041 Spliceosome [BR:npr03041]
    108786742
Messenger RNA biogenesis [BR:npr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108786742
Spliceosome [BR:npr03041]
 Complex C
  Other components
   EJC/TREX
    108786742
SSDB
Motif
Pfam: SAP
Other DBs
NCBI-GeneID: 108786742
NCBI-ProteinID: XP_018411601
Position
Unknown
AA seq 720 aa
MAELEDVTLDGRPLDSLRVTDLRAALEERGLAKSGAKNTLMKRLKGALMLENLQKQSTHT
GFQPNSQMGEEMGQNSFIKQYLEKQQELLRQRLQKEAREAQETEEPLAESEEENTNPDIM
PEPPDLLCSVLKVPDVDLGKRTQKKSVSVLEDPDDSEEEIPKKRERRSSRVKQAKTSKPP
VLTQPGQEQEPRRSSTRVRRSKGDIAKEEVEDVGEEEEEEMEEKELPVEKDEEEPPKRRR
SSRSATIHQTKSPKVKRSPSPPELSETVSKSTSADSEEMAEERVPPLLSLERFQHQMSEK
QMTTATEKAVSPQFLHKESSKSHRSPQKWGRHVRERNESSSDPSLQQPPAATCVIQQAPN
LREEGEKAKPKILDSHMAEESGSITRGAATKDVKVKSSLVLMKPQVRSKSEGKAYVSEQS
LHIVEKSSSRGVQAMSILEKQKPESYENKESTITLSSCPEVGRSNVKTMSILEKVNKDKL
DANPAVRGGDSFEPEKAEVVSPVYGTGLSKTRKLRIRSSSANRNQLDPNSLQTVTCPDVK
EIHETEELSVSLNVEQTAVLAVTMLNKPDLKPCGPMQTREEATDLLSKQVKESLSTAKTE
KEPTEKSDLDVSCLSVPDIMGGITSSTDHSLGEKVSYSGSLELQQKESMHVNEISEIKQA
EDQLSAQDFNMSENTVLLGESKKFGKPDKVTSKMVLEEIQLKPFVPLGQAQQNILIQLLK
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggcagaactagaagacgtgacgctggacgggaggccgctggacagccttcgggtcacc
gatttaagagcggcacttgaagagcgaggactagctaagagcggcgcaaagaacacactc
atgaagcgtttaaaaggggcactgatgctggaaaacctccagaaacaatctactcatact
gggttccagccaaactctcagatgggggaagaaatgggacagaacagctttataaagcag
tacctagaaaagcagcaggaactgctccgacagagactgcagaaagaagctcgagaggca
caagaaactgaagaacctttagccgagtcggaggaagaaaatacgaatcctgatattatg
ccggagcctcctgatcttctctgttctgttttgaaggtgccagatgttgacctggggaaa
cgcactcaaaaaaaaagtgtttctgtcttggaagacccagatgattctgaggaagagatt
cccaaaaagagggagaggcggtcatcccgagtaaagcaggctaaaacttcaaaacctccg
gttttaacacagccaggtcaggagcaagagccccgcagatcatccacccgagtgagacgg
tctaaaggagacattgccaaggaagaagtggaagatgtgggtgaggaagaggaggaagaa
atggaagaaaaagagctgcccgttgaaaaggatgaagaagaacctcccaaaagaagacga
tcctcaagatcagctactattcatcagacaaagtctccaaaagtcaagcgttcaccttcc
cctcctgaattatcagaaactgtttccaaatcaacttctgctgactcagaagaaatggca
gaagaacgcgttccaccactgctttctctggaacggttccagcatcagatgtctgaaaag
cagatgaccacagcaactgagaaagctgtttccccacaatttctccataaggagagttca
aagagtcatagatctcctcaaaagtgggggcgtcatgtgagagaacggaatgagagcagt
tccgatccttcattacaacagcctccagctgcaacttgtgttatccagcaggctcctaac
ttgcgtgaagaaggtgaaaaagctaaacccaaaatactggattcacatatggctgaagag
agtggctccataacaagaggtgctgcaacaaaagatgtcaaagtgaaatcgtcactggtt
cttatgaagcctcaggttcgctcaaaatctgaaggaaaagcatatgtgagtgaacagagc
ctgcatatagtggagaagtcatcctcaaggggagttcaagctatgtctattttagagaag
caaaaaccagaatcttatgaaaataaagagagcaccattacattatcaagctgtcctgaa
gttggaagatcaaatgttaagaccatgtctattttggagaaggtaaacaaagacaaattg
gatgcaaatccagcagtgcgcggtggtgattcttttgagcctgaaaaagcagaagtagtt
tccccagtctatggtactggcttatctaaaacaagaaaactaagaatcagatcatcctct
gcaaatcgaaatcaactagaccctaacagtttacaaactgtaacttgtcctgacgttaag
gaaatccatgaaacggaggagcttagtgtgtcccttaacgtggagcaaactgctgtactt
gcagtgactatgttaaacaagccagatctgaaaccatgtggaccaatgcagacaagggaa
gaagcgactgatttactgagtaaacaagttaaagaaagtttatcaactgcaaagacagaa
aaagagcctactgagaaatcagatttagatgtttcttgtttgtctgtccctgacataatg
ggagggatcaccagcagcactgaccattctctgggtgaaaaggtctcttattccggctca
ttagaactacagcaaaaagaatctatgcatgtgaatgaaatttctgaaattaaacaggca
gaagaccaattatcagctcaagattttaatatgtctgaaaatactgtgctgttaggggaa
tctaagaaatttgggaaaccagacaaagttacctctaaaatggttctagaggagattcag
ttaaagccatttgtgccattgggtcaagcacaacagaatattctaatacaacttctgaaa
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

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