KEGG   Nanorana parkeri (Xizang Plateau frog): 108788347
Entry
108788347         CDS       T04897                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain
  KO
K06752  MHC class II antigen
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04145  Phagosome
npr04514  Cell adhesion molecules
npr04672  Intestinal immune network for IgA production
npr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:npr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108788347
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108788347
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    108788347
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108788347
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:npr04147]
    108788347
Exosome [BR:npr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108788347
  Exosomal proteins of epithelial cells
   108788347
  Exosomal proteins of breast milk
   108788347
SSDB
Motif
Pfam: C1-set ig Ig_3 Marek_A Ig_2 I-set PRIMA1
Other DBs
NCBI-GeneID: 108788347
NCBI-ProteinID: XP_018413604
Position
Unknown
AA seq 260 aa
MSGAFIVLLLIYGTLWTPGTGYLMQKISLCSYSDNKQGNITFATGFTLNRQLLLSYSKPD
EMYITCPSGCIREMGIVAASFATLLNTNPNTATQVKKEEERCKDGVKKFWDKTVERRVKP
SVEVFLPVQLHPDSLPVLVCQVWGFYPQDISVAWFKNDKLVKNYTEAVRTGDWTYRILAT
LDLRNFLPKDNYTCLVNHPTLDTPIVKTWKHGLTNIQIIKISVASVVFALGLVCLITGIV
CWKNAKRSGYSPIPGYNDEN
NT seq 783 nt   +upstreamnt  +downstreamnt
atgagcggagcttttattgtattgctgctgatatacggcacgctatggaccccgggaaca
ggttacttgatgcagaaaatttccctgtgctcgtacagtgataacaagcaaggaaatatt
acgtttgctactgggttcaccttgaaccgccaattattgctgagttatagcaaacctgat
gaaatgtatataacatgtccatcgggttgtatccgggagatggggattgttgccgcgagc
tttgccacccttctcaacaccaatccaaacacagcaacccaggttaagaaagaggaagaa
cggtgcaaggatggagttaagaaattctgggacaagacagtggagaggagagttaaacca
tctgtggaggtctttttaccagttcagttacatcctgacagtctcccggtgctggtctgc
caggtgtggggattttacccccaagacatcagcgtagcttggtttaaaaatgacaagttg
gtcaagaactacacagaggctgtgaggaccggagactggacctaccgcattttggcgacc
ctggatttgaggaatttcctccctaaagacaactacacctgtttggtcaatcacccaact
ctggacacacccatagtgaagacctggaagcacggcttgaccaacatccagatcattaag
atcagtgtcgcgtcggtggtcttcgcgctgggactcgtctgcctcattacaggaatcgtt
tgttggaagaatgccaagagaagcggttattctcccattccaggatataatgatgagaac
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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