KEGG   Nanorana parkeri (Xizang Plateau frog): 108788491
Entry
108788491         CDS       T04897                                 
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1F-like
  KO
K04853  voltage-dependent calcium channel L type alpha-1F
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04010  MAPK signaling pathway
npr04020  Calcium signaling pathway
npr04260  Cardiac muscle contraction
npr04261  Adrenergic signaling in cardiomyocytes
npr04270  Vascular smooth muscle contraction
npr04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:npr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108788491
   04020 Calcium signaling pathway
    108788491
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    108788491
  09153 Circulatory system
   04260 Cardiac muscle contraction
    108788491
   04261 Adrenergic signaling in cardiomyocytes
    108788491
   04270 Vascular smooth muscle contraction
    108788491
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:npr04040]
    108788491
Ion channels [BR:npr04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   108788491
SSDB
Motif
Pfam: Ion_trans PKD_channel GPHH HemY_N
Other DBs
NCBI-GeneID: 108788491
NCBI-ProteinID: XP_018413753
Position
Unknown
AA seq 1500 aa
MNGTDTLNSTGSSQAHKRRQHYSKHKNQGAGGVHRSPRALFCLYLNNPIRRACISIVEWK
PFDILILMTIFANCVALGVYIPFPEDDSNIANHNLEQVEYIFLIIFTVESFLKIIAYGLV
LHPSAYIRNGWNLLDFVIVVIGLFSVILEQFSHKQGDAHHMSGKPGGFDVKALRAFRVLR
PLRLVSGVPSLHIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFYIGI
DLVSEEEPAPCAFSGHGRECNLNTTECRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGW
TDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLR
EKQQMEEDLMGYLDWITQAEDIEPEGDDREERHNRVTLADLTSRRKGKLQWLMHPNHSSE
NHTSLPASETASINTENIDDEHSNCCTLCMSKLSQTGCCRSVRRWNRTFRRKCRLAVKSV
PFYWVVLILVFLNTLTIASEHYRQPEWLTQIQDYAQQFLPFLLPIILHLPFFSLFTVEML
LKLYSLGFHAYFMSFFNRFDCFVVCGGILETVLVEFHIMSPLGISVLRCVRLLRIFKVTR
HWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDTF
PQALLTVFQILTGEDWNAVMYDGIMAYGGPFFPGMLVCIYFIILFICGNYILLNVFLAIA
VDNLADADNINSKDKKXEGNSYDQRKITPLWKDHREYLRGDFPHPLLGLQDGGGKKSGKK
EDSSVKVPCEEEDNEEEEGSEESEEEEEEDEEGSLPDSHLDKLAEFAPKEKVLPIPEGSA
FFILSNTNCLRVGCHRLIHHHIFTNLILVFIILSSISLAAEDPIRAHSFRNHILGYFDYA
FTSIFTVEILLKMTAYGAFLHKGSFCRNWFNLLDLLVVSVSLISFGIHSSAISVVKILRV
LRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFFSCT
DEAKHRPGECKGTFIVYKEGDVTHPMVRERIWHNSEFSFDNVLSGMMALFTVSTFEGWPS
LLYKAIDANGENVGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFRAQGEQEYKN
CELDKNQRQCVEYALKAQPLRRYIPKAKYQYKVWYMVNSTGFEYIMFVLILLNTIALAMQ
HYEQSQPFNYAMDILNMVFTGLFTVEMVLKLIAFRPKHYFCDAWNTFDALIVVGSLVDIA
VTEVNNGWHVGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYV
ALLIAMIFFIYAVIGMQTFGKIAMQDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEIML
ASLPGKRCDSESDFAPEEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRD
WSILGPHHLDEFKRIWSEYDPEANIVSALFQHCICSLPALYLLSSSIVSALFLQKRKKSF
NT seq 4503 nt   +upstreamnt  +downstreamnt
atgaatggaaccgataccctgaattccaccggcagctcacaggctcacaagaggcgccag
cactacagcaagcataaaaaccaaggggccggtggggtgcaccgcagccccagggctctt
ttctgtttgtacctcaacaaccccattcgaagggcctgcatcagcattgtggagtggaaa
ccttttgatatccttatcctcatgactatctttgccaactgtgtggcgctgggtgtctac
atcccttttcctgaagatgactccaacatagccaaccacaacctggaacaagtggaatac
atcttcctcatcatcttcactgtggaaagtttcctgaagatcatcgcctatggactggtc
ctgcaccccagtgcctatatcaggaatggctggaacctgctggatttcgtcattgtggtt
atagggctcttcagtgttattctggaacagttttctcataaacaaggagatgctcatcac
atgagcgggaagcccggtgggtttgatgtgaaggcgctaagagcatttcgtgtactgaga
cccctgcgacttgtatctggtgtcccaagtctacacattgtactgaattctatcatgaag
gcaatggtccctttactgcacattgctcttctcgtcttgtttgtcatcattatttacgcc
atcattggactggaactctttattggccgcatgcacaaaacctgcttttacatcgggata
gacctggtctcagaggaagagccggcgccctgcgctttctccggccacggaagggaatgc
aatttgaataccacagagtgccgcgggaagtgggagggacccaacggtggcatcaccaac
ttcgacaatttctttttcgccatgttgaccgtgttccagtgcatcaccatggagggctgg
acagatgttctctactggatgcaggacgccatgggctacgagctcccctgggtttacttt
gtcagcttggttatcttcggatccttctttgtcctaaaccttgtgttgggtgtcttgagc
ggcgagttctccaaggagagagagaaggccaaagcccgcggcgacttccagaagctgagg
gagaagcagcagatggaggaagatctgatgggttatctagactggatcacccaagctgag
gacatcgagccagaaggagacgaccgagaagaaagacacaaccgcgtcacgttggctgat
ctgacgagcaggaggaagggaaagctccagtggttaatgcatcctaaccattcctcagaa
aaccacaccagccttcctgccagcgagaccgcctcaatcaacaccgagaatatagatgac
gagcacagcaactgctgcaccctgtgcatgagtaagttgtcacagaccggctgctgccgt
agcgtgaggagatggaaccgaaccttccggaggaaatgtcgcctggctgttaaatctgtc
cccttctactgggtggttctgatcctggtcttcctgaacacactgacaatagcctccgag
cactaccggcaaccggaatggctgacgcagatacaagattatgcccagcaatttctaccg
tttcttcttcccattatcttacatttaccatttttttctctcttcaccgtggaaatgctt
ctgaagttatacagtctgggtttccacgcctatttcatgtcattcttcaatcgctttgac
tgctttgtggtgtgcggggggattttggagacagtcctggtggagttccacatcatgtcg
cctctggggatctctgtcctgcgctgcgtccgcctcctcaggatcttcaaggtcaccaga
cactgggcatcgctaagtaacctggtcgcctccctgctgaactccatgaaatccattgct
tctttactgctgcttctcttcctcttcatcatcatcttctccttgcttgggatgcagctc
ttcggagggaaattcaacttcgacgagacccagaccaaaaggagcacttttgacacgttc
ccccaggcgctgctcaccgtcttccagatccttacaggagaggactggaatgcagtgatg
tacgatgggatcatggcctatgggggaccattttttcctggaatgctggtctgtatatat
ttcatcatcctcttcatttgtggaaactatatcctactgaacgtcttcttggctatcgcc
gtggacaatttggctgacgctgacaatattaacagtaaagacaaaaagtgagaagggaat
tcttatgatcaacgcaaaataaccccattgtggaaagaccacagggagtatctgagaggg
gatttccctcaccccctgctggggctccaggacgggggagggaagaaatctgggaaaaaa
gaagacagctctgtgaaggtcccctgtgaggaggaagacaatgaggaagaagagggaagt
gaagagtctgaggaggaggaggaggaagacgaggaaggaagcctcccggactcccatctg
gataaattggcagagtttgccccaaaggagaaagttcttccgatcccagagggtagcgcc
ttcttcattctcagcaacaccaactgcctccgagttgggtgtcatcgactgatacatcat
cacatttttaccaacctcatcctggtcttcattatcctcagcagcatctctctggcagca
gaggatcccattcgcgcccactcctttcgaaaccatattttgggctattttgattatgcg
tttacctctatctttaccgtagagatcctgcttaagatgacggcatatggcgcctttttg
cacaaaggctccttctgcaggaactggttcaacctcctggacctccttgttgttagcgtc
tctctcatctccttcgggatacactcgagcgcgatctccgtggtaaagattctccgtgtg
ctgagagtgctgcgtccactgagggccattaaccgagccaaggggctgaagcatgtggtc
cagtgcgtgtttgttgctatccggacgatcggtaacattatgatagtcaccactctcctc
cagttcatgttcgcctgtatcggggttcaacttttcaaggggaaattcttcagctgcact
gatgaggcgaagcacagacctggggaatgcaagggcacattcattgtatacaaggaggga
gatgtcactcatccgatggtacgagaaagaatctggcacaacagcgaattcagctttgac
aacgtcctgtcaggaatgatggcgctctttactgtgtctacttttgaaggctggccatcg
ctcctgtataaggccatcgacgccaatggggaaaacgtggggcctatttacaattaccgc
gtggagatttccatctttttcatcgtctacatcatcatcatcgcattcttcatgatgaat
atcttcgtaggtttcgtcatcatcactttccgggcccagggcgagcaagagtacaagaac
tgcgagctggacaagaaccagcgtcagtgtgtggagtacgccttgaaggcacagcctctg
cgtagatacatccccaaggccaaataccagtacaaagtgtggtacatggtcaactccacc
ggcttcgagtacatcatgtttgtgctcatccttctcaacactattgccctggcaatgcag
cattatgagcaatcccagccatttaattacgccatggatatcctgaatatggtcttcaca
ggactgtttacagtggagatggtgctgaaactcatcgcattcaggccgaagcattatttc
tgtgacgcctggaacacgttcgatgctctcatcgtggtggggagcctggtggacatcgcc
gtcaccgaagtcaataatggatggcatgttggggagagctcagaagacagttcccggatc
tccatcaccttcttccgactcttccgtgtcatgcgcttggtgaaactcttgagtaaaggg
gaaggtatccgaacgctgctgtggaccttcattaagtccttccaggctttgccttacgtt
gctctcttgattgcgatgatattttttatctacgccgtcatcggcatgcagacgttcggc
aaaatcgccatgcaggacggaactcagatcaaccggaataacaactttcaaaccttcccc
caggctgtgctgctgctattcaggtgtgccacgggggaggcctggcaagagatcatgttg
gccagcttgcccggcaagagatgcgacagcgaatctgacttcgccccagaggaagagttc
acctgcgggagcaacttcgccatcgtgtatttcatcagctttttcatgctttgcgccttt
ctgattattaacttgtttgtggccgtcattatggataacttcgattatctgacaagggat
tggtctattctgggcccccatcatttggatgaattcaaaaggatctggtccgaatatgac
cccgaggccaacattgtatctgctctcttccagcattgtatctgctctcttccagcattg
tatctgctctcttccagcattgtatctgctctcttcctacagaaaaggaaaaagagtttt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (62)   

Download RDF
DBGET integrated database retrieval system