KEGG   Nanorana parkeri (Xizang Plateau frog): 108794365
Entry
108794365         CDS       T04897                                 
Symbol
TAF6L
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108794365 (TAF6L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:npr03021]
    108794365 (TAF6L)
   03036 Chromosome and associated proteins [BR:npr03036]
    108794365 (TAF6L)
Transcription machinery [BR:npr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108794365 (TAF6L)
   Coactivators
    SAGA/TFTC/STAGA complex
     108794365 (TAF6L)
Chromosome and associated proteins [BR:npr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     108794365 (TAF6L)
    STAGA complex
     108794365 (TAF6L)
    TFTC complex
     108794365 (TAF6L)
    SAGA complex
     108794365 (TAF6L)
    SLIK complex
     108794365 (TAF6L)
SSDB
Motif
Pfam: TAF6_C TAF ASH2L-like_WH
Other DBs
NCBI-GeneID: 108794365
NCBI-ProteinID: XP_018420901
Position
Unknown
AA seq 573 aa
MSHTEDRRYVELCQDSVRLTAESVGLEIPDEVAALLAEDVCYRLREITQFTAQSLRHCRR
RRLTVEDFNRALRWINVEPVYGHGSPDPVSFRSVRDGDCHCAEDRDVNLVELALATNIPK
GTAETAVRVHVSYLDGKGNLEPQGTVPAAVSLLTDDLLKYYQRVTRAVLGDDLHLMKVAL
QDLQTNPKIAALLPYFVYVVSGVKSVSHDLEQLSRLLQLVRSLLWNPYLYLGSYGYSLMQ
SVLYCVTEPLAASINPLNDHWTLRDYGAGLLSCIWTHRDLAGSLYTQVLQSLQKVLGDPV
RPLCSHYGAVVGLHALGWEAVEQVLYPLLPTYWAGLQTVLDDHSMSNAQVKADGHKVYGA
ILVAVERLLKMKARCSESDKDSPPQSYPSLTSAPSVSLLEMYNELYCFFGDSLAVRFGTG
GTTLQPEMIPKGTQEPKKEGTVEGIRKMPQLTAHGEEEVTSTSRPTQRPPQISLASASRP
RGGSRQGQRVLGVREAFQRSRLTPRGSPRFTFLIGGRQAGRGGGGRRFQSVFQLHTGPGA
TASRYAQKLPMIGRVAKTGCKGMQTDLSLYLPL
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgtctcacacagaggaccggcgctatgtggagctgtgtcaggattcagttcgtctgact
gcagagagtgtgggcctagagatcccggatgaggttgctgcattgctggcagaggatgta
tgttacaggctacgggaaatcactcagtttactgcacagtcgctcaggcactgtaggcga
cgaagactgaccgtagaggacttcaaccgtgctcttcgctggattaatgttgagccagtg
tatggccacggatcacctgatccagtttcatttcgaagtgtcagagatggtgattgtcat
tgtgcagaggatcgtgatgtcaatctagtggaactggctttggccacaaacattccgaaa
gggacagctgagactgcagtgagggtccatgtctcttacctggatggaaaaggaaacctg
gagcctcagggcacagttcctgctgcggtctctttattaacagatgacctactaaaatat
tatcagcgtgtgacaagagcagtgctgggggatgatttacatctcatgaaggtggctctt
caggatttacagactaacccaaagattgcagctctgttaccttattttgtgtatgttgtc
agtggggttaagtcagttagtcatgatctcgagcagctgagccgcctgttgcagttggtg
aggtctctcctgtggaacccctatctttatttgggaagttatggatacagtctcatgcag
agtgtattgtactgtgtgactgagcctttagctgcttctataaacccacttaatgaccac
tggactttgcgagactatggcgcaggattgttgagttgtatttggacacaccgagattta
gccggctcgctgtatactcaggttttgcagtctttgcagaaagttctgggagatcccgta
cgcccactctgttcccattatggagctgttgttggtcttcatgctttaggctgggaggca
gtagagcaagtattgtatcctttgcttccaacctactgggctgggctacagactgtatta
gatgatcactccatgtccaatgcacaagtcaaggctgatggtcacaaggtctatggagct
atcctggttgctgtggaacgtctccttaaaatgaaagctcgctgtagtgaatcagataaa
gactcgcccccacaatcttatccgtccttgacttctgcacccagtgtgtccttgctggag
atgtacaatgagttgtattgcttctttggagatagcttggctgtgcgttttggcacagga
ggaacaaccttgcaaccagagatgattcctaaaggtacacaggagccaaaaaaggaaggt
actgtggaagggatacggaaaatgccacagctgacagctcacggggaggaagaagtgaca
agtacaagcaggccaactcagcgtcctcctcagatctcgcttgcatctgcatctcgccct
cgtggaggttcaaggcaaggacaaagggtgctaggtgtgagagaagcatttcaaagaagt
agacttactccacgtggttccccccgtttcacctttcttataggagggagacaggcaggg
cgagggggaggcggacgcaggtttcagagtgtcttccaactgcatactggacctggggcc
acagccagccggtatgctcaaaagctacctatgattgggcgagtggcaaaaactggatgc
aaagggatgcaaacagatttgtcactttatttgcctctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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