KEGG   Nanorana parkeri (Xizang Plateau frog): 108795672
Entry
108795672         CDS       T04897                                 
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
  KO
K12035  tripartite motif-containing protein 71 [EC:2.3.2.27]
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:npr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npr03019]
    108795672 (TRIM71)
   04121 Ubiquitin system [BR:npr04121]
    108795672 (TRIM71)
Enzymes [BR:npr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108795672 (TRIM71)
Messenger RNA biogenesis [BR:npr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108795672 (TRIM71)
Ubiquitin system [BR:npr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    108795672 (TRIM71)
SSDB
Motif
Pfam: NHL Filamin DUF5128 SGL zf-B_box zf-C3HC4 zf-RING_5 zf-RING_2 zf-RING_UBOX zf-C3HC4_4 DUF4094
Other DBs
NCBI-GeneID: 108795672
NCBI-ProteinID: XP_018422466
Position
Unknown
AA seq 869 aa
MASFPESDFQLCPLCKEMCVSSAPISSSSSSSSSSQTSSSSTGGSGNLGSAPRRLHVLPC
LHAFCRQCLEGHRSPGDSLQLHCPVCDHKVLMSEAGMDALPSSTFLHLSNLLDAVVGTAE
ESSNNGSRGGPRRPQRPRSASCSSSSLLRRAPPSQSEPRCSSCDDGNGASSHCLDCQENL
CDNCLRAHQRVRLTKDHFIERFTGPGGRVPGCISGTASPCNSAASSAATTSSSSTSSPFQ
GNAFPILPMYPERLAYCQQHDEEIYKSGERKTVYTLADLVRIKTWVLHFYCDSCSIPICR
ECTMGRHAGHSFVYLQDALQDSRALTIQLLADAQQGRQAIQLSLEQAQALAEQVEMKAKV
AQSEIKAVTSRHKKALEERECELLWKVEKIRQVKAKSLYHQVDKLHQALNKLDSTINAVQ
QVLEEGCTMDILIARDRVLAQVQDIKNARGLLQLQEDDRIMFTPPDQALYLAIKSMGLVS
SGAFATLTKATGEGLKRALQGKVASFTVIGYDHDGEARLSGGDLITVLVMGPDGNLFAAD
VTDQMNGTYLVSYRPQLEGEHLISVMVCNQHIEKSPFKVNVKSGRCYLGIGLPSLSFGGE
GDHDGKLCRPWGVCVDREGYIIVADRSNNRIQIFKPCGTFHHKFGSLGSRPGQFDRPAGV
ACDSSRRIVAADKDNHRVQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDT
RNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFSQDGYLVVTDFNNHRLLIIKPDCQ
SAHFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFEPNGSFLCKFGTQGSGFG
QMDRPSGIAVTPDGTIVVVDFGNNRILAF
NT seq 2610 nt   +upstreamnt  +downstreamnt
atggcttcattcccagagtcagatttccagctgtgcccactgtgtaaggagatgtgtgtg
tcctctgcccccatctcctcctccagttcatcctcatcctcttctcagacctccagcagc
agtaccgggggcagcgggaacctcggctcggcgccccgaagattgcacgtcttgccgtgc
ctgcacgccttctgccggcagtgcttggagggccaccggagccctggcgactccctgcag
ctgcactgccccgtgtgtgaccacaaggtgctcatgtctgaggccggcatggacgctctg
ccctcttctaccttccttcatctcagcaacctgctggatgccgtggtggggaccgccgag
gagtcttcaaacaacgggagcaggggcggcccccggcgtccgcagaggccgcgctcggcg
tcgtgctcgtcctccagcctcctccgccgggcgccgcccagccagagcgaaccgcgctgc
tcctcctgcgacgatggcaacggggcgagctcgcactgcctcgactgccaggagaacctg
tgcgacaactgcctgcgggcgcatcagagggtgcgactcactaaggaccacttcatcgag
cgcttcactggaccagggggcagggtgcccggatgtatcagcggcaccgcgtccccgtgc
aactccgcagcgtccagcgctgccactacctcatcctcgtccacctcgtcgcccttccag
ggaaatgctttccccatcctgcccatgtacccggagagattagcctactgtcagcagcat
gacgaggagatttacaaatctggagagcgcaagacagtgtataccctggcggatctggtg
aggattaagacttgggttctacatttctattgtgattcatgctctatccctatatgtcgt
gagtgcactatgggacgtcatgctgggcacagttttgtctacctccaagatgctcttcag
gattcaagggcacttactattcagcttctggctgatgctcaacagggacgtcaagcaatc
cagctgagtcttgagcaggcccaagcattggcagagcaagttgagatgaaagccaaagta
gcgcaatctgagatcaaagcagtcacttccaggcataagaaggcgctcgaggagagggaa
tgtgagctgctatggaaggttgaaaagattcgtcaagtgaaagcaaagtctctctaccac
caggttgataaactccaccaggctctaaacaaactggacagcacaatcaatgcagtacag
caggtcttggaagaaggctgcacaatggatatccttattgcccgggatcgtgtcttagct
caagtgcaagatataaaaaatgctagaggtctgttacagcttcaagaagacgatagaatc
atgttcactccccctgaccaggccttgtaccttgccataaagtccatgggattagtcagc
agtggggcttttgccacactaacaaaagccacaggagaaggcttaaaacgagcccttcag
ggcaaagttgcatcattcactgttattggctatgaccatgacggtgaagcacggttatca
ggtggtgaccttataactgtactggttatgggtcctgatggaaatctgtttgcagctgat
gtcacggatcagatgaatggtacatatttggttagttataggccgcaacttgaaggcgaa
caccttatctctgtaatggtgtgcaatcagcacattgaaaaaagcccatttaaagtcaat
gtgaagtcaggtcgttgctacttggggattgggcttccttccctttcattcgggggagag
ggtgatcacgatggaaaactttgccgtccctggggtgtctgtgtggatagggaaggatat
attattgttgctgatcgaagcaacaaccgcatccaaatctttaagccatgcggtactttt
caccacaagtttggcagtttgggatcaagacctggccagtttgaccggcctgctggtgtt
gcgtgtgacagttctcgtaggattgtggcagcagataaggacaaccatcgtgttcaaata
ttcacttttgagggccagttcttacttaaatttggtgagaaagggaccaagaatggccag
tttaactacccttgggatgttgccgtcaattcagaggggaagatccttgtctctgacact
cgaaatcaccgtgtccaattatttggtccagacgggacattcctgaacaagtacggcttt
gaaggtgctctctggaagcactttgactctcctcgcggtgtggcattcagtcaagatggg
tacctagttgttactgactttaataaccatcgtctgctcataatcaagccggactgccag
tcagcacatttcttgggttccgagggcacaggcaatgggcaattcctgcggcctcaaggt
gttgccgtagatcaggaaggacgcatcattgttgcagattctagaaaccacagagtacaa
atttttgagccaaatggaagtttcttatgtaaatttggcacccaaggaagtggctttggc
cagatggaccgcccatccggtatagctgttacacctgatggcacaattgtcgtggtcgac
tttggtaataatcggattcttgccttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (59)   

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