KEGG   Nanorana parkeri (Xizang Plateau frog): 108801697
Entry
108801697         CDS       T04897                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
  KO
K20103  ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:npr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npr03019]
    108801697
Enzymes [BR:npr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     108801697
Messenger RNA biogenesis [BR:npr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     108801697
SSDB
Motif
Pfam: Helicase_C DEAD ResIII YscJ_FliF MPH2
Other DBs
NCBI-GeneID: 108801697
NCBI-ProteinID: XP_018429103
Position
Unknown
AA seq 794 aa
MSVSQYTRHLLIDQHRVHARADFCKRDPEGLSSPGDHLLRSQKEVLVTIPQCLEILLLSP
HRQDWVKKIKYVIFDEVHCLGGEIGAEVWEHLLVMIRCPFLALSATISNPEHLTEWLRSV
KKYWQLNNERESSLVTNPPQKERQNKPLKPEKKSYRVRLVCYDRRYNDLETNICSVKNSK
VTFDHYHPFAALTIDHVKNYGIPKDLTCSPRECIQLYDTMAKVWPTSANMKSLDPEEDIH
LKDNILITKDDAKKYQEALKSELVDWIEKGHCAQAAEKKKQTPQDEKEISKLQDKAAKLE
KSLESGIDMFDSKPPHGITRNQESQIIKQANYNSLMQKIKKLQEIPPDCTYADEKSVDNK
TLGLLYRRMKFSSHDRFKTLITLSKRGIGYHHATVDAKGRIFVEMLFRMGYMKVVTATGS
LALGINMPCKSVVFLHDSVYLDALNYRQMAGRAGRRGLDLEGSVYFFNIPVPKVKKLMKS
NVPELRGQFPLSISLVLRLMLLAAKADDKEDAKAKVLSVLKHSLMTFKHPNEAQMLKLYC
IFSLQFLLSKEYLNQDCNPTEFTGLVTHLHYHEPSNFLFVTFLEKGLFHQLCKPLPGDPT
KFPDSVMKTLVLILANLFARSYLPPSRRSPEDTFHQSRIHLEELPKDFADVVKEYNKDVA
TVFGHCILTASKLADMEKEYQLPLTQIGFSGKECMDSGLVDHLMSNSEGRSGISPFACLS
GNTDHDLMKMTNISSLMLQTVQIPTKYIPLFHLTAKDICGRKTFLNSYAFDFYKHGSLTV
LHNNNGYALVQNAL
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgagtgtctcgcagtacactagacatcttctcattgatcagcatcgagttcatgcgaga
gcggacttctgcaaaagggaccctgaggggctttccagccctggcgatcatctgcttcgc
agccaaaaagaggtgctggtgacaattccacaatgtttggaaattcttctgctatctccc
catcggcaggattgggtgaaaaaaatcaaatatgtaatatttgatgaggtacactgcttg
ggaggagaaattggcgcagaagtctgggagcacctactagtcatgattcgctgtccattc
ttggctttatctgccacaattagtaacccagagcacctcaccgagtggcttcgatcggtc
aaaaaatactggcagctaaataatgaaagggaatctagtcttgtgacaaatccaccacaa
aaggaaagacagaataaaccgctaaaaccagaaaagaagtcatacagagttcgactagtc
tgttatgacaggagatataacgacttggagacaaacatttgttctgttaaaaattccaag
gttacatttgaccattatcatccatttgctgccttaaccatagatcatgtgaagaactat
ggaattccaaaagatcttacatgttctcctcgagaatgcatacagctatatgacaccatg
gcgaaagtatggccaacctctgcaaatatgaagtctttagatccagaagaggatatacac
ctgaaggacaatatattaattaccaaagatgatgcaaaaaaatatcaagaggcccttaag
agtgaattagttgactggattgaaaaaggacattgtgcacaggctgcagagaaaaagaaa
cagactcctcaggatgagaaagaaatttcgaaactacaagataaagcagccaaactagaa
aaaagcttagagtcaggcattgacatgttcgattcaaaacctccacatggaatcacaagg
aatcaggagtctcagatcatcaaacaggctaattacaatagtttaatgcagaaaattaag
aagctccaagaaatacccccagactgtacctatgctgatgaaaagagtgtggataacaag
accttgggattattgtatagaagaatgaaattctcaagtcatgatagatttaagacactt
ataacgctctctaagagaggcattggataccaccatgcaacagttgatgctaaaggaaga
atttttgtggaaatgctgttcagaatgggatacatgaaagttgtaactgctactggctca
cttgcactgggaatcaacatgccatgtaaatctgtggttttcctgcatgattcagtttac
ctggatgcactaaactatagacagatggcaggtcgtgctggaagacgaggactggatcta
gagggaagtgtgtatttcttcaacattccagtaccaaaagtgaaaaaacttatgaagtcc
aatgttccagagctaagaggccagtttcctctgagcatttctcttgtactaagactcatg
cttctggcagccaaagcagatgacaaagaggatgctaaagcaaaagtgttatcagtttta
aagcattcccttatgacgttcaaacatccaaatgaagcacaaatgttaaagctttactgt
atattctcactgcagttcctgctatccaaggaatacctgaatcaagactgtaatcctaca
gaatttacaggacttgttacccatctacattatcatgagccatccaattttctgtttgtc
accttccttgaaaaaggcctctttcatcagctgtgtaagccactacctggagacccaaca
aaatttccagactctgtaatgaaaacgttggttctgatactggcaaatttatttgcaaga
tcatatttaccaccaagtaggcgttcacctgaggatacatttcatcagtcaaggatccat
ctagaagagctacctaaagactttgctgatgttgttaaggaatataacaaggatgttgca
acagtctttggtcactgcattcttacagcctccaagctggcagatatggagaaagaatat
cagctacctctcacacaaatcggcttttcaggcaaggagtgcatggactcaggactggtg
gatcatctgatgtcaaactcagaaggaagaagtggcatatccccatttgcatgtctgtct
ggaaatacagatcatgacttgatgaaaatgacaaacataagcagtctcatgttgcaaaca
gttcaaatacctacaaagtatattcctttattccatctgacggcaaaagacatttgtgga
agaaaaacctttcttaactcctacgctttcgatttttacaaacatggatccttaacagtc
cttcacaataacaatgggtatgcacttgtccaaaatgcactgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (57)   

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