KEGG   Nanorana parkeri (Xizang Plateau frog): 108803458
Entry
108803458         CDS       T04897                                 
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
npr  Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:npr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108803458 (CNOT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npr03019]
    108803458 (CNOT1)
Messenger RNA biogenesis [BR:npr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108803458 (CNOT1)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     108803458 (CNOT1)
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT
Other DBs
NCBI-GeneID: 108803458
NCBI-ProteinID: XP_018430799
Position
Unknown
AA seq 2274 aa
IVTRHGPEADRHLLRCLFSHVDFSGDGKSSGKDFHQTQFLIQECAALITKPNFISTLSYA
IDNPLHYQKSLKPSPHLFAQLSKVLKLSKVQEVIFGLALLNSCNSDLRGFAAQFVKQKLP
DLLRSYVDVDVSGSQEGGFQDIAIEVLHLLLSNLLFGQKGAFGVGQEQIVAFLKTLRRGP
SWPYPIPSNLKLALWHISNGCSVRELTVLHVEECRNIIVQFGVREVTAVQVARVLGMMAR
THSGLTDGISLQSISAPGSGIWSDGKDKNDSVQAHTWNVEVLIDVVKELNPNLNFKEVTY
ELDHPGFLIRDSKGLQTVVYGIQRGLGMDVFPVDLIYRPWKHAEGQLSFVQHSLINPDIF
CFADYPCHAVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSYPIKH
CPDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIM
HAMAEWYMRGEQYDQARLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDK
WLTDKIREHGEPFVQACMTFLKRRCPSILGGMAPEKDQPKSAQLPPETLATMLACLQACA
GSVSQELSETILTMVANCSNVVNKARQPPPGVMPKGRPPSTSSLDAISPVQIDPLAAMAS
LSISGSAAPHTQSLPAFPPNLGSAFSTPQSPAKAFPPLTTPNQSTAFSGLGALSSQLPGG
LGTGSLTGMGTGGLGLPAVNTDPFGQRKLSTSGLSQPTFQQSKFFVVXPKENQHFTKEID
DEANSYFQRIYNQPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFFPQY
PDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYFFGIAALDRFKNRL
KDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALSQAQAQAQ
VPAKAPLPGPVIANAVTTSTATTSAKTVTITRPTGVSFKKDVPPSINTTNIDTLLVATDQ
NERTVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKDEFMPWVSQYLVMKRVSIELN
FHSLYSNFMDALKNAEFNKMVLAETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITL
AKNKPILHTDLDVKSLLLEAYMKGQQEMLYVVPFVAKVLESSVRSVVFRPPNPWTMALMN
VLAELHQEHDLKLNLKFEIEVLCKNLVIDLNDLKPGNLLKDKDRLKSLDEQLSAPKKDVK
PPEQELLPNIISANEYAIRTAGKLWASVEKQESDAVFTATATAPPPSVTCAATVPPQPQY
SYHDIHVYSLAGIAPHITLNPTIPLFQTHPHLKQYVRQAIERAVQELVHPVVDRSIKIAM
TTCEQIVRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKTSFATSL
RAASPQQREMMEQAAAQVAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEG
RRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQ
PMKQQAWATDDVAQIYDKCIAELEQHLHAIPPTLAMNPQSQALRGLLEAVALARNTRDAI
AALGLLQKAVEGLLDATSGADADLLLRYRECHLLVLKALQDSRAYGAPWIYGFLTGLSGR
CLIECRDEYKYNVEAVELLIRNHLVNMQQYDVHLAQSMENGLNYMAVAFAMQLVKILLVD
DRSVSHVTEAEFFHTIETLMRINAHSRGNAPEGLPQLMDVLRSNFEAMIERAQGGPNFMM
HSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTD
DLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGE
ATNTVTKINLLNKVLGIVVGVLLQDHEVRQSEFQQLPYHRIFIMLLLELNAPEHVLETIN
FQTLTAFCNTFHILRPTKASGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLF
KYLAPFLRNVELSKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLI
LSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTF
LSELRSNLQVSNEPGNRYSIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQ
NLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITR
NT seq 6825 nt   +upstreamnt  +downstreamnt
attgtgactcggcacggtccggaggcagacagacacttgttacgctgcctattctcacat
gtggatttcagtggcgatggtaaaagcagtggtaaagattttcaccagacccagtttctg
attcaggagtgcgcagcgctgatcaccaagcccaacttcatctccaccctctcgtacgcc
attgacaatccattgcactatcagaagagtctgaagccatctccccacctttttgcccag
ctgagtaaagtcctgaagctcagtaaagttcaggaggtgatctttggcttggctcttctg
aactcctgcaacagcgacctgcggggcttcgcggcgcagtttgtgaagcagaagctcccg
gatctcctgcgttcctacgttgacgtggacgttagtggcagccaagaaggtggattccaa
gatattgccatagaggtcctgcacctcctcctctccaatctccttttcggccagaaggga
gccttcggggttggacaggagcagattgtcgcctttcttaaaaccctgcgcagaggtccc
tcgtggccgtaccccatcccatccaacctgaagctggcactttggcatatttcgaatggc
tgctcggtgcgagaactgaccgtgctgcacgtggaagaatgccgcaatatcatcgttcag
tttggcgtccgggaggtgactgcggtgcaggtcgcccgggtcctggggatgatggcacgg
acacattctgggctcacggacggcatctccttacagtccatctcggcccccggcagcggc
atctggagcgatggcaaggacaagaatgacagcgtgcaggcccacacttggaacgtggag
gttctcattgatgtggtgaaggagctgaatcccaacctgaacttcaaggaggtgacgtac
gagctggaccacccggggttcctgatccgtgacagcaaggggcttcagactgtagtatac
ggcatccagagggggctgggcatggatgtgttccccgtcgatctcatctatcggccttgg
aaacatgcagaaggccagctctccttcgtgcagcattccttgattaatccggacatcttc
tgctttgccgactacccctgtcacgccgtggcaactgacatcctaaaggctccaccagaa
gacgacaatcgggagatagcgacatggaaaagtttggatctgatcgagtccctgcttcgg
ctggctgaggtgggccaatacgagcaggtcaagcagctcttcagctaccccatcaaacac
tgtcctgacatgctggtcctggctctgctccaaatcaacacttcctggcacaccctgcgc
catgaactcatctccaccctgatgccaatctttctgggtaaccatcccaactccgccatc
attttgcactatgcgtggcatggccagggccagtctccctccatccgccagctgatcatg
catgccatggcagagtggtatatgcgtggtgagcagtatgaccaggcccgcctgtctcgt
atacttgatgtggcccaggacttgaaggccttgtcaatgctgctgaatggtactccattt
gcctttgttattgatcttgctgcactcgcttcgcgccgggaatacctcaaactggacaaa
tggctgacggataaaatacgggaacacggggagccctttgtccaagcctgcatgacgttc
ctcaagcggcgctgtccttccatactgggcggcatggctccagagaaagaccagccaaag
agcgcccagcttccgcctgaaactctggccacaatgctggcatgccttcaggcttgtgcg
gggagtgtgtctcaggagctctctgaaactatccttaccatggtggccaactgcagcaat
gtggtgaacaaggcgcgtcagcctcctccgggggttatgcccaagggtcgccctcccagt
acgagcagcctggacgccatctctccggtacagatcgatcctctggctgcaatggcctcc
ctcagcatcagcggttctgccgcccctcacacacagagccttccagctttcccccccaac
ctgggctccgctttcagcacgccgcagtcaccagccaaggcattcccccccctcacaact
ccaaaccaatctactgcttttagtggcctcggtgctctgtcttcgcagttgccaggtggc
ctcgggacgggcagcctcactggaatgggcactggaggattgggccttcccgctgtgaac
acggacccatttgggcagaggaaactcagcacctctgggctcagtcagccgacattccag
cagagtaagttttttgttgtnnnnccaaaagaaaaccagcactttactaaagagatcgac
gacgaagccaacagctacttccagcgcatctacaaccagcccccacaccccaccatgtcc
gtggatgaggtgttggaaatgctgcaaaggttcaaagactccaacataaagcgggagcgc
gaagtcttcaactgcatgctgcgcaacctatttgaggagtatcgcttcttcccccagtac
ccggacaaggagttgcatattaccgcctgtttgtttggtggcatcattgaaaagggacta
gtcacgtacatggctctaggactggcactgcgctatgtactggaagcactgcgcaaacct
tacggatccaaaatgtatttctttggcatcgctgcactagataggttcaaaaacaggttg
aaggactatcctcagtactgtcagcacttggcttccatcagtcactttatccagttccct
catcacctgcaggagtatatagagtacggtcagcagtcccgggaccctccggtcaagatg
caggggtctattaccacaccaggcagtattgcactttcacaggcccaggctcaagcccag
gtccccgccaaagctcccctccccggcccggtaatcgccaatgccgttaccacatctacc
gccacaacctcagccaaaaccgttaccattaccaggcccaccggcgtcagcttcaagaag
gatgtaccgccatccatcaacactaccaacatagacacgcttctagtggccactgaccag
aacgagaggactgtggagccgccggaaaatgtgcaagagaagatcgccttcatatttaat
aacctgtcgcagtccaacatgacacagaaggtggaagagctgaaggagacggtgaaagat
gaattcatgccttgggtgtctcagtacctggtgatgaagagggtgagcattgagctgaac
tttcacagtctgtattccaacttcatggacgctctgaagaatgccgagttcaacaagatg
gttctagccgagacctacaggaacatcaaggtcttgctgacgtctgacaaggctgctgct
aacttctctgaccgctctctgctgaagaacctgggtcactggctgggcatgatcaccctg
gccaagaacaaacccatcttgcacacggacctggatgtgaagtcgctgctgctggaggcc
tatatgaagggacagcaggagatgctctatgtggtgccttttgttgctaaagtcctggag
tccagtgtcaggagcgtggtatttcgacctccaaacccgtggacaatggcgcttatgaat
gtcctggcggagctgcaccaagagcacgatctgaagcttaatctgaagtttgagatcgag
gtcctatgtaaaaatctggtgattgacctcaacgacttgaagccggggaatctcctgaag
gacaaggaccgcctgaagtctctggatgagcagctttccgccccgaagaaagacgtgaag
ccaccggaacaggagctgttacccaatatcatcagtgccaacgagtacgccatccgcacg
gcgggcaagctctgggcctcggtggagaagcaggagtctgacgcagtcttcacagctaca
gccacagccccgcctcctagcgtcacctgcgccgccacggttccgccgcagccgcagtac
agctaccacgacatccacgtctattcccttgctgggattgcacctcacataacgctcaat
cccacgatccctctcttccagacgcacccgcacctcaagcagtacgtacggcaggccatt
gagcgggcggtgcaggagctggtgcatcccgtggttgaccgttccatcaagatcgccatg
accacctgcgagcagatcgtacggaaggactttgcgctggattcggaggagtcccgcatg
cgggtggccgctcatcacatgatgcgcaatctgactgccgggatggccatgatcacctgc
agagagcctctgctgatgagtattgctaccaacctgaagaccagctttgccacttccctg
cgggctgcctccccccaacagcgggagatgatggaacaggccgctgctcaggtagctcag
gataactgcgagctggcctgctgcttcatacagaagacggcggtggagaaggctggaccg
gagatggacaagaggctggccacggaatttgaattgcggaagcatgccaggcaggaagga
cggcgctattgtgatcccgttgtactgacttaccaggcggagcggatgccggagcagatc
cgactgaaggtcggaggtgtggaccccaaacagctggctgtttatgaggaatttgcacgc
aatgttcctggcttcctccccaccaacgacttgactcaacccacaggattcctggctcag
cccatgaagcaacaagcctgggccaccgacgatgtcgcgcagatttatgacaagtgcatc
gccgaactggagcaacatctgcacgccatcccgcccacgctagccatgaaccctcagtct
caggccctgcgaggtctgctggaagccgtggcactggcccgtaacaccagggatgccatt
gctgctttggggctgctgcaaaaggctgtggaaggtctgcttgatgccactagcggtgcc
gatgccgacctcctgctccgataccgggaatgtcatctactcgtcctgaaagctctgcaa
gacagccgggcctacggggctccatggatatacggcttccttaccggcttgtctggcagg
tgtctgatcgagtgtcgggacgagtacaagtacaacgtggaggctgtggagcttctgatc
aggaaccatcttgtgaacatgcagcagtacgatgtccacctggcacagtccatggagaac
gggctgaactacatggccgtggccttcgctatgcagctggtgaagatcttgcttgtggac
gatcgcagcgtcagtcacgtgacggaggcggagtttttccacaccatagagactctgatg
cgtattaatgcgcactccaggggcaacgcaccagaagggcttccacagctcatggatgtg
ctccgctctaacttcgaggccatgattgaacgggcccagggcggccccaacttcatgatg
cattctgggatatctcaagcctcggagtacgatgatcccccgggactccgggaaaaggcc
gagtacctcctgagagaatgggtcaatctgtaccactcggctgcggccggacgggacagc
accaaggccttctctgcgtttgttgggcagatgcaccaacagggcattctgaagaccgac
gacctcatcacccgattcttccgcctgtgtacggagatgtgcgtggaaatcagctaccgc
gctcaggccgagcagcagcacaacccggccgccaaccctaccatgatccgagccaagtgc
taccacaacctcgacgccttcgtcaggctcatcgcgctgctggtcaagcactccggagag
gccaccaataccgtgaccaagatcaaccttctcaacaaagttctcggtatcgtggtcgga
gttctgctccaggatcatgaggtgaggcagagtgagttccagcagcttccgtaccatcga
atcttcatcatgctgctgctggagttgaacgccccggaacatgtgttagaaaccatcaac
ttccagaccctcaccgccttctgcaataccttccacatcctccggcccaccaaagcctcg
ggcttcgtctacgcctggctggagctgatctctcaccgcatcttcatcgcacgaatgttg
gcgcacactccccagcagaaggggtggccgatgtacgcccagctactgatcgacctcttc
aaatatctggccccgttcctccgaaacgtggaactctccaaacctatgcaaatcctctac
aagggcacactgcgcgtgctgctggttctgctccacgacttcccagagttcctctgtgat
tatcactatggcttctgtgacgtcatcccacccaactgcatccagctgaggaatctgatc
ctgagtgcctttccccgaaacatgcgacttccggaccccttcacccccaacctcaaggtg
gacatgttgagtgagataaacatcgctcccaggatcctcaccaacttcaccggagtgatg
ccgccgcagttcaagaaagacctggactcctacctgaagacccgctcgcccgtcaccttc
ttgtcggagctgcgcagcaatttgcaggtatccaacgagcccggaaaccgttacagcatc
cagctgatcaatgcgttggtcctttacgtcggcacgcaggccatcgcgcacatccacaac
aaaggcagcacgccctccatgagcaccatcacccactctgcccacatggacatcttccag
aacctggccgtggacctggacactgaagggcgctacctcttcctgaacgccatcgccaac
cagcttcggtaccccaacagccacacgcactacttcagctgcaccatgctgtacctcttc
gctgaggccaacaccgaggccatccaggagcagatcactcggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (55)   

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