KEGG   Nostoc punctiforme: Npun_R5251
Entry
Npun_R5251        CDS       T00713                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
npu  Nostoc punctiforme
Brite
KEGG Orthology (KO) [BR:npu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:npu03016]
    Npun_R5251
Enzymes [BR:npu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     Npun_R5251
Transfer RNA biogenesis [BR:npu03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Npun_R5251
 Prokaryotic type
    Npun_R5251
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 rOmpB
Other DBs
NCBI-ProteinID: ACC83577
CyanoBase: Npun_R5251
UniProt: B2J3C7
Position
complement(6498176..6499135)
AA seq 319 aa
MQITFLGTSSGVPTRSRNVSSVALRLPQRAELWLFDCGEGTQHQIMRSELKISQLSRIFI
THMHGDHIFGLMGLLATCGLAGNVERIDIYGPPGLNDYIQSASRYSYTHFSYPIKVHAIR
PGVIYEDDYFTVSCGNLHHRITAFGYRVAEKDRTGRFDVEKAKALDIPSGRIYGQLKRGE
TVILDDGRVIDGTQLCGPTEIGRKIAYCTDTIYCDGAVELAHDADVLIHEATFAHQDADM
AFQRLHSTTTMAAQTALAAGAHRLIMSHFSPRYAPGNTLELKDLLKEARAIFPRTDMAYD
FMIHEVPRRREVELTKVGV
NT seq 960 nt   +upstreamnt  +downstreamnt
gtgcagataacattcttagggacgagttccggtgtacccacgcgatcgcgcaatgtttcc
agtgtcgccctgagattaccccaaagggcagaattgtggttattcgactgtggtgaaggc
acccagcatcaaattatgcgaagtgaacttaaaatcagtcaactctcccgaatttttatc
acccacatgcacggcgaccacatctttggcttgatgggacttcttgctacttgcggcttg
gcaggtaatgtggaacgaattgatatctatgggccacctggattaaatgattacattcaa
tccgcctcacgttactcctacacacacttttcttacccaattaaagttcacgccatccgt
ccaggggtaatttatgaagacgattacttcaccgttagctgcggtaatttgcatcacagg
attacagctttcggctaccgcgtagccgaaaaagaccggacaggacgctttgatgtggaa
aaagccaaagcgttggatattccttctggtcgtatttacggtcaactcaagcgcggtgaa
actgttatcctagacgacggtcgggtgattgatggcacccaattatgcgggcctacagaa
attggccggaaaattgcctattgtacagacacaatttattgtgatggtgcagtggaattg
gctcatgatgcagatgtattaattcacgaggcaacctttgcccatcaagatgcagatatg
gcttttcagcgcttgcattccacaaccacaatggcagcgcaaacagctttagctgctggg
gcacatcgactgattatgagtcatttcagcccccgttatgctcctggcaataccttggag
ttgaaggatctcctcaaagaagcccgtgctatttttccccgcactgacatggcttatgat
ttcatgattcatgaagtacctagaagacgagaagtagagttaaccaaggtaggcgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system