KEGG   Neorickettsia sennetsu: NSE_0859
Entry
NSE_0859          CDS       T00329                                 
Name
(GenBank) type IV secretion system protein, VirB6 family
  KO
K03201  type IV secretion system protein VirB6
Organism
nse  Neorickettsia sennetsu
Pathway
nse03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nse00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NSE_0859
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nse02044]
    NSE_0859
Secretion system [BR:nse02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   NSE_0859
SSDB
Motif
Pfam: TrbL
Other DBs
NCBI-ProteinID: ABD46403
UniProt: Q2GCS0
Position
complement(758873..762322)
AA seq 1149 aa
MKRLPNRIMEFVPRVRQVMMKKIRVAKVSNRIARYCPSGLKRVLVLMLGLFLLSGCEKCE
NVCPRCIAADDFGIPKSSAAALIEYDSPLLKSDAALLGLEDNTSGRQLMRWEDSGYVTSG
EPITLNVEGRWLFMPARSVLRFSRDEIQKVFRCGDIDYEALKEADEEFKKNFPNQSCTYL
ATQMTDITTGCLINGAKIDPKFSQSGCILEKGYGLYLLFYRPGDPNPNTTFSSIATPASP
AMHIGYTGDSITIESVFTSDCTRLNLEPGWKIYYKLMDVFYQNNVGGYSLEFRTGVIDPK
NTAKFFESVRSMLQDLLTGQNEAIYKAITSNNDYVSLVKALIVLMIVLTGLRFLMGISES
PPSELLIKVLKMAIILQLISPSSWDFFYNNLFRLFIDGLNEVIAVVNSHTGAGYQLDQPF
AFLDDTVNILFKMLVSTKVKAIILAYPLGVFWWLILFFILVIYVVLVAYAFVVYLTALIG
LSVLIVLMPVLFLGMLFGQLKHTFDNWFTQALSFCFQAIMIFTVVSLFSAMIKDQFYRNT
GYTICCNKFWVFPFNISVYAWTPGQKFMPLTITHMWESKRVEFTGGAKVIDIPPYYKERG
CRFVDYPFYDPQISNANCGIAGFAGKGADWERIEKIRESDSGLLDMAEVFVLLLLSVIMF
HMRDLCQSIGASLVGASPFQAVIGGAYAAQDGIGGLYRAGKMVIGALADKLPVLSGVRNS
ADDIASLRSRVGESIAAKLNETNLGEATMKVLSTVGDVSSGIVKGTGYLLGVNSELSDHY
YEKKAFRQINYTQALMGYHLVSIVGTRDLSDSPGIKMLFGGLKHMSDKYFVGAKEESLFG
GLRKLYVCEREKIHDYYLGIQREKLPECMDDIKRNEKPTADFSSSTEDGLSIDKKSDANG
NLSHHPNSLPPSYSEIEFENTTPDISLELPEFVSTGETSPGLTPQTAVEEAHRDSVGEES
SAFDVSRGSSEDMSAGETSPELTPQTAVEEAHRNSVGEESSAFDVSRGSSEDMSAGATSP
ELTPQTAVEEAHRDSVGEESSAFDVSRGVTKNTATDEAGLELASHGRTEQDTAEASNAED
TASAFSNVTQDGGGIFGSLIEGAVSKQGTSKDPSHSVTSAEEQAKKPTKKPKGRKLPGQF
VETEENSEE
NT seq 3450 nt   +upstreamnt  +downstreamnt
atgaagagactgccgaaccggataatggaattcgtacccagagtcaggcaggtgatgatg
aaaaagattagggtagcgaaagtgagtaatcgtatagcaagatactgtccaagtggtttg
aagcgtgtgcttgtactcatgcttggactgtttttactgtctggctgtgaaaaatgtgaa
aatgtgtgtccaagatgcatagcagcagacgattttggtatacctaagtcaagtgctgct
gcgttaattgagtatgatagcccacttcttaagtcagatgcagcactgcttggtctagag
gacaatacttcaggcagacaactaatgcgctgggaggattccggttatgttacttcgggt
gaaccaatcactttgaatgtcgaggggcggtggttgtttatgcctgcgcgtagcgtactc
cgtttttctagggacgaaatacaaaaggttttccgttgtggggatattgactacgaggct
ttgaaggaagctgatgaagaatttaaaaagaatttcccaaaccagtcctgcacctactta
gcgacacaaatgaccgatattacaacaggttgcttgatcaatggtgcaaaaatagatcct
aaattctcccagtctggatgtatattagaaaaggggtatggattatatctacttttttac
cgtcctggtgaccctaatcctaatactactttttcctccattgcaacccctgcctctccg
gcaatgcatattggatataccggtgatagtatcaccatagagtcggtttttacaagcgat
tgcacgcgtttaaacttggagcctggctggaaaatctactacaaacttatggacgtgttc
taccagaataacgtgggtggttattctctggaatttcgtacaggggtgattgatccaaaa
aatactgcgaagttttttgaaagtgtacgttccatgctacaggatcttcttaccggacag
aacgaggcaatatacaaggccattacgtctaataacgactatgtttcattagtgaaggct
ctaatagttctgatgattgttctcacaggtcttagatttcttatgggaatatctgaaagt
ccgccaagtgaattactgataaaagttttaaaaatggcaattattcttcagctaatttct
ccgagtagctgggattttttctataataatttgttccgtttgtttatagatggactaaac
gaagttatagcagtagtgaactctcatactggtgctggttaccagctagatcaacctttt
gctttcctcgatgataccgtgaacattttgtttaagatgcttgtttcgacaaaagtcaag
gcgatcatacttgcgtatccattgggagttttttggtggttaatccttttctttatactg
gtgatctacgttgtccttgttgcatatgcttttgttgtttacctaaccgcccttattgga
ctatcagtgctaattgtcttgatgccggtcctatttttgggaatgctattcggacagctt
aaacatactttcgataactggtttacccaggcactgagtttctgtttccaagcaataatg
atttttactgtagtttcgctgttttcagcaatgataaaggaccaattttacagaaacaca
ggctacacgatctgttgcaacaagttctgggtttttccatttaatatttctgtttacgcc
tggacacctggacagaaatttatgccactcactataactcacatgtgggagagtaaacgc
gttgagtttactggtggtgcaaaagtgattgatataccaccttattacaaagaaaggggt
tgtagatttgttgattatccattctatgatccacaaattagtaatgctaattgtgggatt
gctggttttgctggaaaaggagcagattgggagcggatagagaagataagagaatctgat
tctggcctacttgatatggccgaggtatttgtgctgttgcttctttcggtgattatgttc
cacatgagagatctttgtcagtctataggggcgtcgcttgtcggtgcatcaccgttccaa
gctgtcataggtggtgcttatgctgctcaggatggtataggtggactctacagagctggg
aaaatggttataggtgcgcttgccgacaagctccctgtgcttagtggagtacgtaacagc
gcagatgatatagcttctctcagaagtcgtgttggtgaaagtattgcagccaaattaaac
gagacaaacttgggtgaagccacaatgaaagtactctccactgttggtgatgtctccagc
ggtatagtaaaaggtacaggttatctcttaggtgtgaattcagagctcagtgatcactat
tatgagaaaaaggcctttaggcaaatcaactatacacaggctcttatggggtaccatctt
gtatcgattgtaggtaccagggatttaagtgattcaccaggaataaaaatgctttttggt
ggtctcaaacatatgtcggataagtattttgttggagcaaaggaggaaagtctttttggt
ggtttacgtaaactttacgtctgtgaacgggaaaaaattcatgattactatctcggcatt
caacgtgagaaattaccagaatgtatggatgatatcaaacggaacgaaaagccaactgct
gatttttctagttctactgaggatggtctttcgatagataaaaaatcagacgctaatgga
aatctatcacatcatcctaattcattacctccttcatatagcgagatcgaattcgaaaac
acaactcctgatatttcgttggagctgcctgaatttgttagtactggtgaaacgtctcca
gggttaacgcctcaaacggctgtagaagaagcacatcgtgattccgttggagaggaaagt
agtgcttttgatgtttcaagagggtcaagtgaagatatgagtgctggtgaaacgtctcca
gagttaacgcctcaaacggctgtagaagaagcacatcgtaattccgttggagaggaaagt
agtgcttttgatgtttcaagagggtcaagtgaagatatgagtgctggtgcaacgtctcca
gagttaacgcctcaaacggctgtagaagaagcacatcgtgattccgttggagaggaaagt
agtgcttttgatgtttcaagaggggtgactaaaaatactgctactgatgaagccggtctc
gagttagcatctcatggtagaacagaacaagatacagctgaagcttctaacgcagaagac
actgcttctgcgttttctaatgtcactcaggatggtggcggtatttttggctcccttata
gagggtgctgtaagcaaacaaggtacatctaaagatccttcgcatagtgttacttcagca
gaagagcaggctaagaagcctacgaaaaagcctaaagggcgaaaattgccaggccagttt
gttgaaactgaggaaaactccgaggaataa

  All links  
Gene (31)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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