KEGG   Neorickettsia sennetsu: NSE_0860
Entry
NSE_0860          CDS       T00329                                 
Name
(GenBank) type IV secretion system protein, VirB6 family
  KO
K03201  type IV secretion system protein VirB6
Organism
nse  Neorickettsia sennetsu
Pathway
nse03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nse00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NSE_0860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nse02044]
    NSE_0860
Secretion system [BR:nse02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   NSE_0860
SSDB
Motif
Pfam: TrbL
Other DBs
NCBI-ProteinID: ABD46453
UniProt: Q2GCR9
Position
complement(762252..765761)
AA seq 1169 aa
MRRVVLGLLLLLSACDMGCIYPGDGVSANFTNVIVPAYLEGMDPSKPSTLWVDSGIKIRE
GEEVPFGVIGDIDLCGKLFNRKEFEICSEWNCQVIEVGNRFCANGAPAGIHNPSDLSDAK
NKEPLCEKASTTHERYYVDTYLEVSPGEKVLFELIPVVSVNLVDCDNIPLGFSWYNNEDL
KDVKGKKMQLVSGGEVDPVAICKAGGEVHLQRGGNKLQVFLPPSLKGELLNSALVGNGYT
PRSNRVIVGNGEGKWIEAAAVDMRVIVPHIFSDEKFCDAGFKSQVDHEEIRKGKKISWEY
KYKDSCDSKKDEGKLKRFETYKVNKMCGNFISDSTYKDGIYSIRYDEDFDSLNPCFRARR
RNKSDLERAWADLLVAKIGRAGKDKSTLLLSDDEAQLCIYNIGTEETNLYGNRVKRCVDV
GEYGGSVPSLELNTWFTIPRSISGGSPLLLGIAGNEDSSKNSVYSGYRVRVRKSCSYQNG
EKLYVYIGDGPPSIAPGVSHPNVHELRFNADTPKRAVVNPLNIDSSTYSLSFNGSGKVYF
GIAGAADSSLVKAVKTGKYLPSEDNKYTVSIVQERWYPNFSGPFNTIYHAIVKLFYGKGQ
KNPYGKPEATGVIVQIYNAIVGKIAPAVQALIVLYLVTYGLSFLLGIIRDPRSDVVMRVM
KVAFILLLVSDYSWKFFGETIFDLFVNSSNELIYYFTGNLSGKYSPDSTFEFLDRTVGVI
ITNQFWLRMLALFLSGPAGWFIMSIILWGVFLFFSCIIEAMVIYLMILIATGLLFLLAPI
FITFLIFQRTKPLFEGWLKMLISFALRPIFIFGTLALLNAVMMATLYGVNNFGVCPGCVV
STDIFGSDLCIISSLIPMGFDPGMASMDRFLIPGSTNSGFMGLPVSLVSVIVFLLVAHAM
KSFLKITDSMVDMITGTMMGYTGVTGGGSPSDAGHAAYQAMLSVVGLDDATQSEIGQALR
SRARSRRSITLEVAEDAEKVPSSEDAALEKAERSSLKDSLEDPNIKSTSLNNEGSSNAPV
VTSGAQTDTNREQGIYSLAGAPGVRPGEESIPNPIYEGAPPGGEHIHAGINDVRGQTPYS
LAGAPEVRPGEESIPNPIYEGAPPGGEHVHAEMGKQNTHTLLGPSGAEIIREDGSQISPA
VESTDSNEETAEPDNGIRTQSQAGDDEKD
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgcgtagagtagttctgggcttattgcttcttttaagtgcttgtgacatggggtgtatt
tatcctggcgatggtgtaagtgcaaactttacaaatgtcattgtgccagcctatctagaa
ggtatggatccctccaagcctagtacattgtgggtagattcaggcatcaaaattagagaa
ggtgaagaggtaccctttggtgtaattggtgacatagatctatgtggaaaacttttcaat
agaaaggaatttgaaatatgttctgaatggaattgtcaagtaatcgaggtaggtaataga
ttttgtgctaatggtgctcctgcaggcatacataatccatcagacctttcggatgctaag
aataaagaacctctatgtgagaaagcgtcaacaactcacgagaggtactatgttgatact
tacctagaggtttcaccgggagagaaggtgctctttgagttgataccagtagtcagcgtc
aatctagtggattgcgacaatataccactcgggttttcctggtataacaatgaagatctc
aaggacgtaaagggaaaaaagatgcaacttgtttccggaggtgaggtggatccggttgct
atatgcaaagccggtggggaggttcatctacaaaggggtgggaataagttgcaagtgttt
cttcctccttctttgaagggggagttgttgaattcagctcttgttgggaacggctatacc
ccaagaagtaacagagtaatagttggtaatggggaaggtaagtggatagaggcagctgca
gtcgatatgcgggttattgttccacatattttctctgatgaaaagttttgtgatgctggt
ttcaagagtcaggttgatcacgaagaaattcgcaaagggaagaagataagttgggaatac
aagtacaaggattcttgcgattcgaaaaaggatgaggggaagcttaagaggttcgaaacg
tacaaggtaaataaaatgtgtggaaattttatttcagacagtacgtataaagatggaata
tatagtatcaggtatgatgaagactttgatagtttgaatccttgttttcgtgcacgcaga
aggaacaagtcagacttagagagagcgtgggctgatttacttgttgcgaaaataggtaga
gctggcaaggataagtctacactattgctaagtgacgatgaagctcagttgtgcatttat
aacattggtacggaagaaacaaatctctacggtaatagggtaaaaagatgtgttgatgtc
ggtgagtatggtggatctgtaccatcattggagttgaatacatggtttaccattccgcgc
agtatcagtggaggaagtccgctgctccttgggattgcaggtaatgaagattcttcaaaa
aattctgtatattcaggttaccgtgtaagagtgcgaaaaagttgctcataccaaaacggg
gaaaaactttatgtctatattggtgacggtccgccaagtatcgcccctggtgtttcacat
ccaaatgtgcatgagcttcgtttcaatgctgatactccgaagagggcagttgttaatcca
ctaaatatcgattcgagcacttatagtctctctttcaacgggagtggaaaggtctatttt
ggtatagcaggggctgccgatagcagtttggtgaaagccgtaaagacgggaaaatacctg
cctagtgaagacaataaatacacggtcagtatagtgcaagaacggtggtatccaaacttt
tccggcccttttaacacgatctatcatgctatcgtaaaactgttttatgggaagggtcaa
aaaaatccatatggtaaacccgaagcgacaggagtaatagtacaaatttataacgcaatt
gttgggaaaattgcacctgctgttcaggcattgatagtgctttacctcgtcacttatggg
ctgtcctttctacttgggataatcagagatccaaggtcagatgttgtaatgcgggtgatg
aaggtagcattcattttgctcttagtgagcgattatagctggaagttctttggcgaaaca
atttttgatctgtttgttaattcttctaatgagctcatctactatttcactggtaacctt
agtgggaaatattctccggatagtacatttgaatttctggatagaaccgttggcgtgata
ataacaaaccagttttggttaaggatgctagctctttttctttcgggtcctgctggttgg
tttatcatgtcgatcatactgtggggtgtgtttctcttttttagttgcatcatcgaggca
atggtgatctatctcatgatattgattgcgacaggtttactttttttgttggcacctatc
tttataactttcttgattttccagagaacaaaaccattgtttgagggttggctgaaaatg
ttgatctcttttgctctgcgtccgatttttatttttggaaccctcgcattattaaatgca
gtaatgatggcaacgctatacggggtgaataattttggtgtctgtcctggttgcgttgtt
tccacggatatattcgggagtgacttatgcatcattagttcgctcatacctatgggattt
gatcccggaatggctagtatggaccgtttccttattcctggcagtaccaattctggcttc
atgggtcttcctgtgtcgttggtttcagtgatagtttttctcttggtggctcatgctatg
aagagcttcctgaaaataacggattctatggtggacatgatcacgggtacaatgatgggt
tataccggtgttacaggtggtggtagtccttcagatgcaggtcatgctgcatatcaagct
atgttgtctgttgttggtttggatgatgcaactcagtccgaaatagggcaagcacttaga
tcacgtgctcgtagccgccgcagtattactttggaagttgccgaggatgctgaaaaagtg
ccttcaagtgaagatgctgcacttgagaaagctgaacgtagttctttaaaggattctctc
gaagatccgaatataaaatcgacatctttgaacaatgagggatcgtcaaatgctcctgtt
gtgactagtggagcgcagactgatacaaatagggaacagggcatctatagtctggctggt
gctcctggggttagacctggagaggaaagtatacctaatcctatctacgaaggtgctcct
cctggtggagaacacattcatgctggaataaatgatgtacgtggccagactccttacagc
ttggctggtgctcctgaggttagacctggagaggaaagtatacctaatcctatctacgaa
ggtgctcctcctggtggagagcacgttcatgctgagatgggtaagcaaaatactcatact
ttgctaggtccttctggagcagaaataattagagaagatggttcacaaatctctccagca
gtagagagtacagactctaatgaagagactgccgaaccggataatggaattcgtacccag
agtcaggcaggtgatgatgaaaaagattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (46)   

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