KEGG   Nostoc sphaeroides: GXM_05220
Entry
GXM_05220         CDS       T06325                                 
Name
(GenBank) rnd, ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
nsh  Nostoc sphaeroides
Brite
KEGG Orthology (KO) [BR:nsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nsh03016]
    GXM_05220
Enzymes [BR:nsh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     GXM_05220
Transfer RNA biogenesis [BR:nsh03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    GXM_05220
SSDB
Motif
Pfam: DNA_pol_A_exo1 HEF_HK DUF1811 FapA
Other DBs
NCBI-ProteinID: QFS47728
UniProt: A0A5P8W4Q9
Position
Gxm1:complement(4707951..4708871)
AA seq 306 aa
MPYLTSAHEISAIVAEYTNAKMLWIDTEVADYKSRNPRLSLIQVLDNPKDMSGDRVYLLD
VLDQPNIIAEFIEEIMINSAIEKVFHNASYDLKLLGNKKAKNITCTLEMAKKIPYYLLPL
PNYQLKTIATSLCNFNNIDKQEQTSDWGKRPLTEEQIEYAYLDCIYLAQIHSNLLDLQAQ
ASPDPATEDLISLSSTYSQLEQQYKLLNSEFEHLQERMKKAMQAQNISETAYYKLTSYER
TTIKATFTELARLAQSEGINLDFPITLTQKLQKDLGQNLEQLSVDIEKTTSWRLNSKNKE
SDIEDE
NT seq 921 nt   +upstreamnt  +downstreamnt
atgccgtaccttacttccgcccacgaaattagtgccattgttgctgaatataccaacgct
aaaatgctgtggatagatacagaagttgctgactataaaagtcgtaatccccgactatcg
ctgattcaggtattagataatcccaaagatatgagtggcgatcgcgtttaccttttagat
gtcctagatcagcctaatattatagctgaatttattgaagaaattatgataaattctgca
attgaaaaagtttttcacaacgccagttatgatctaaagcttcttggtaacaagaaagcc
aaaaatattacttgcactttagaaatggcaaaaaaaattccctactatcttttaccatta
cctaattaccaacttaaaaccatagctacatcactttgtaactttaacaatatcgataaa
caagaacaaacaagcgattggggaaaacgtcctctgactgaagaacagatagagtatgct
tacttagattgtatttatctggctcaaattcactcaaatttattagatttacaagctcaa
gccagtcccgatcctgcaacggaagatttaatatcactaagtagcacatactcgcaactt
gagcaacaatacaagttgttgaattcagaatttgagcatttgcaagaacgcatgaaaaaa
gccatgcaagctcagaacatatctgaaactgcctattataagctgactagttatgagcgg
actacaatcaaagctacttttacagaattggcaaggctagcacaaagtgaaggtattaat
ttagattttccaatcacactcacccagaaactccaaaaagatttagggcaaaacctagaa
caactctctgtagatattgaaaaaaccacctcttggcggctaaattccaaaaataaagaa
agcgatattgaggatgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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