KEGG   Neisseria mucosa FDAARGOS_260: A6J88_04040
Entry
A6J88_04040       CDS       T04958                                 
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
nsi  Neisseria mucosa FDAARGOS_260
Brite
KEGG Orthology (KO) [BR:nsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nsi03032]
    A6J88_04040
   03400 DNA repair and recombination proteins [BR:nsi03400]
    A6J88_04040
Enzymes [BR:nsi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     A6J88_04040
DNA replication proteins [BR:nsi03032]
 Prokaryotic type
  DNA Topoisomerases
   A6J88_04040
DNA repair and recombination proteins [BR:nsi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      A6J88_04040
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 NPL
Other DBs
NCBI-ProteinID: ARC52175
Position
795200..797506
AA seq 768 aa
MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKNGAVDPEHDFAMKYELIKRN
AKHVDAIVAGAKEAENIYLATDPDREGEAISWHLFEILKSKRGLKNIKPQRVVFHEITKN
AVLDAVANPREIEMDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEG
KEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGAIG
LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSAAKQYKTKSKNAQEAHEAIRPTSVY
RTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTVDITVGKGVFRVTGQVQTFAG
FLSVYEESSDDEEGEDSKKLPEMSEGDKLPVDKLYGEQHFTTPPPRYNEATLVKALEEYG
IGRPSTYASIISTLKDREYVTLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQL
DEIADGKRRWIPVMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM
GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGS
KFIGCANYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATW
NPPVAEECPNCHWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPAPKE
NT seq 2307 nt   +upstreamnt  +downstreamnt
atggcgaaaaacctcttaatcgtcgaatcaccgtccaaagccaaaaccctgaaaaaatac
cttggcggcgatttcgaaattctggcctcctacggccacgtccgcgacctcgtccccaaa
aacggtgccgtcgatcccgaacacgacttcgccatgaaatacgagctgatcaaacgcaac
gccaaacacgtcgatgctattgttgccggagccaaagaagccgaaaacatctacctcgca
accgacccggatagggaaggcgaagcgatttcctggcatctttttgaaatcctcaaatcc
aaacgcggcctgaaaaacatcaagccgcagcgtgtcgtgttccacgaaatcaccaaaaac
gccgtgctcgacgccgtcgccaacccgcgcgaaattgaaatggacttggtcgatgcgcaa
caagcccgccgcgctttggactatctggtcggtttcaacctctcgccattgttgtggaaa
aaaatccgccgcggtttgagcgcgggccgtgtgcaaagtcccgccctgcgtttgatttgc
gaacgcgaaaacgaaatccgtgcctttgaagcgcaggaatattggacggtgcatctcgac
agccacaaaggccgcagcaagttcaccgccaaactcgcccaatacaacggcgcgaaactc
gaacaattcgacctgccgaacgaagccgcgcaagccgacgtgttgaaagaactcgaaggc
aaagaggcagtcgttaccgccatcgaaaagaaaaagcgcagccgcaatcccgccgcgccg
ttcaccacttctaccatgcagcaggatgccgtacgcaaactcggcttcaccaccgaccgc
accatgcgtaccgcccagcagctttacgaaggtatagacgtagggcagggcgccatcggt
ctgattacctatatgcgtaccgacagcgtgaatttggccgatgaagcgttaaccgaaatc
cgccattacatcgaaaacaaaatcggcaaagaatatctgccgagtgccgccaaacaatac
aaaaccaaatccaaaaacgcccaagaagcccacgaggcgatacgtccgacttccgtgtac
cgcacgcccgaaagcgtcaaacccttcttgagcgcagaccagttcaaactctatcaaatg
atttggcagcgcactgtcgcctgtcagatgacgcccgccaaattcgaccaaaccaccgtc
gatattaccgttggcaaaggcgtattccgcgtaaccggacaagtgcaaaccttcgcaggc
ttcctcagcgtttacgaagaaagcagcgacgatgaagaaggcgaagacagcaaaaaactg
cccgaaatgagcgaaggcgacaaactgcctgtggacaaactctacggcgaacaacacttc
accaccccgccgccgcgctacaacgaagccacgctggttaaagccctcgaagaatacggc
atcggccgcccctcgacttacgccagcatcatctccacgctcaaagaccgcgaatacgtt
acccttgagcaaaaacgcttcatgcccaccgatacgggcgacatcgtcaacaaattcctg
accgaacactttgcccaatacgtcgactaccacttcaccgccaaactcgaagaccagctc
gacgaaatcgccgacggcaaacgccgctggattcccgtgatggacaaattctggaaaccg
ttcatcaagcaagtggaagaaaaagaaggcatcgaacgcgccaaattcaccacgcaggaa
cttgacgaaacctgccccaaatgcggcgaacacaaactgcaaatcaagttcggcaaaatg
ggccgcttcgttgcctgcgccggctatcccgagtgcagctacacgcgcaacgttaacgaa
accgccgaagaagccgccgagcgcatcgccaaagccgaagccgaacaggcagaacttgac
gggcgcgagtgccccaaatgcggcggacggctggtgtacaaatacagccgtaccggcagc
aaattcatcggctgcgccaactaccccaaatgcaaacacgtcgagccgctggaaaaaccg
aaagacaccggcgtccaatgcccgcaatgcaaaaaaggcaacctcgtcgagcgcaaatcc
cgctacggcaaactgttttacagttgcagcacctatcccgactgcaactacgccacctgg
aacccgcccgtcgccgaagaatgcccgaactgccattggccggttttaaccatcaaaacc
accaaacgctggggcgtagagaaagtctgcccgcaaaaagaatgcggctggaaagaacag
attgaaccgcctgcgccgaaagagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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