KEGG   Niabella soli: NIASO_10285
Entry
NIASO_10285       CDS       T03682                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
nso  Niabella soli
Brite
KEGG Orthology (KO) [BR:nso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nso03016]
    NIASO_10285
Enzymes [BR:nso01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     NIASO_10285
Transfer RNA biogenesis [BR:nso03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    NIASO_10285
 Prokaryotic type
    NIASO_10285
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AHF15439
UniProt: W0F1T6
Position
complement(2230391..2231143)
AA seq 250 aa
MRYFLEVSYKGTRYSGFQIQQTGSTIQGAIQKALSIFLKQPLVLTGSSRTDSGVHAQQNF
FHFDCVQSFDPNWIYNLNAILPADIVIKNIFEVPPDAHSRFDAGSRSYQYNLYRFKNPFL
ADTAYYFPYKLDEEELQTAATLIKEYTDFTSFSKKNTQVKTCQCTIIESQWGTTEYGLYY
QVTANRFLRGMVRALVATMLKVGRGRLSMDGFRQLLETPRFGAAFFDAPAHGLTLMKVNY
PDDILLNVGF
NT seq 753 nt   +upstreamnt  +downstreamnt
atgcgttattttttggaagtaagctataagggaacccgttacagcggattccagatccag
caaaccggcagcaccattcagggagcgatccagaaagcgctttctatttttttaaagcag
ccgcttgtgctgaccggctcttccagaacagacagcggcgtgcatgcccaacagaatttt
tttcatttcgactgcgtgcagtcgttcgaccccaattggatctataacctgaacgcgata
ctccccgcggacatcgtcataaaaaacatttttgaagtaccacccgatgcgcatagccgg
tttgacgccggcagcaggagttatcaatataatctgtaccggtttaaaaacccgtttttg
gcggataccgcctattatttcccctataagttagatgaggaggaactgcaaacagccgct
acactgattaaggaatacactgattttaccagtttctcaaaaaaaaatacacaggtcaaa
acctgccagtgcactattatcgaaagccaatggggtacaacggaatacggattgtattac
caggttaccgccaaccgttttttacgggggatggtgcgtgccctggtagctaccatgctt
aaggtagggcgggggcgcctatcgatggatgggttccggcagttgctggagaccccccgt
tttggagccgctttttttgacgcgccagcgcacgggctcacgctcatgaaggttaattac
cctgatgatatattattgaatgtcggtttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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