KEGG   Nicotiana sylvestris (wood tobacco): 104213245
Entry
104213245         CDS       T05026                                 
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsy03021]
    104213245
   03036 Chromosome and associated proteins [BR:nsy03036]
    104213245
Transcription machinery [BR:nsy03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     104213245
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     104213245
    SLIK complex
     104213245
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD
Other DBs
NCBI-GeneID: 104213245
NCBI-ProteinID: XP_009761003
UniProt: A0A1U7V3P4
Position
Unknown
AA seq 1709 aa
MAFYRNYSNETVTLDEKSPGEQSMQGIHQDVGNEEVEGSLSENDDNGQLQDEVGVEVEAT
VGDQVPPERRVNLAGKWGSGFWKDCQPIGPSGRSASGEESKSGSEYKNEEESDEVSDGRE
DQLESEDEGRQKEMGKSRSVPADEMLSDEYYEQDGDDQSDSLHYRTANPSSGYSSKPQSR
SIAANKYASRKSKASKDQYGGEYADYDDDDSEDEDDPDDPDYGSTGRGRGIKEKDEDWEG
GESDELNSDDDDVGISDEDEEYFRKPQGKQKNRGGHSVKSTREIRSLATSARRKRGRTSF
EEEESSEHDSENESDEDFGSKPRRVANLRPKNGGRSTAASVSGRNNELRTSSRRSIRKVS
YAESDESEEIDESKKKKSQKEEIEEEDGDSIEKVLWHQPKGMAEEARRNNKSADPMLLSH
LYDSEPDWNEMEFLIKWKGQSHLHCQWKSFVELQHLSGFKKVLNYTKRVMEDVKYRKTVS
REEIEVNDVSKEMDLDIIKQNSQVERVIADRISKDGYGNVVPEYLVKWKGLSYAEATWEK
DVDIAFAQDAIDEYKAREAAAMVQGKSVDFQRKKSRGSLRKLEEQPEWLKGGKLRDYQLE
GLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAK
EFRKWLPDVNVIVYVGARASREVCQQYEFYNDKKAGRTIKFDALLTTYEVLLKDKAVLSK
IRWNYLMVDEAHRLKNSEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKF
KSKDDFVQNYKNLSSFNEMELANLHKELRPHILRRIIKDVEKSLPPKIERILRVEMSPLQ
KQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDAFGSTKL
ERIILSSGKLVILDKLLDRLHETKHRVLIFSQMVRMLDILAEYLSIKGFQYQRLDGSTKA
ELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR
IGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGKLEKKETKKGSLFDKN
ELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEKVEEKAAEAEEGNELLSAFK
VANFCGAEDDASFWSRWIKPDAVGQAEESLAPRAARNIKSYAEASPLVETNKRKKGVDAQ
ERFPKRRKGDSSCTLPAIDGATAQVRGWSYGNLPKRDATRFSRAVKKFGNDSQIGLISAE
VGGAVEAAPTDAQVELFDSLIDGCREAVKGEVVDPKGPLLDFFGVPVKADELLGRVEELQ
LLAKRICRYEDPVSQFRALSYLKPATWSKGCGWNQKDDARLLLGIHYHGFGNWEKIRLDE
KLGLMKKIAPVELQHHETFLPRAPQLKERASQLLQMSCHQEVAAVGGKSINSKVGRKASN
KQKESLPSITAPLGKGKHGKLSSAGLNVKAGKVRASKAQKVEPLVKEEGEMSDNDEVYEQ
FKEVKWMEWCQDVMADEEKTLKRLQRLQTTSADLPKDKVLAKIRNYLQLLGRRIDQIVIE
YEKEPYKQERMTVRLWNYVSTFSNLSGEKLRQIYSKLKQEQHVEARVGPSQFNGSAPGHP
TPGFIPRGLDVAKFEAWKRRKRAEADGHSQVQPQQQRPLTNGTRLSEPNSSSGILGAAPS
DSKQLGNGRPYRTHQSGLPQRPGFSSGPR
NT seq 5130 nt   +upstreamnt  +downstreamnt
atggctttttataggaattattcgaatgaaacagttacattggatgagaaaagcccgggg
gaacagagtatgcagggtatacatcaggatgtaggaaacgaggaagtggaaggtagtttg
agtgaaaatgatgataatggtcagttacaagatgaagttggtgtagaagtggaagcgacg
gtaggggatcaggtgccgcctgaaagaagagttaatttggctgggaaatggggttctggg
ttttggaaggattgtcaaccgattggcccctcgggtaggtcagcttctggagaggaatca
aagagtggatcagaatataagaatgaggaagaatcagatgaggtatctgatggtagggaa
gatcagctagagtcggaagatgaaggaaggcagaaagaaatggggaagagtcgaagtgtc
cctgcggatgagatgttatctgatgaatattatgaacaagacggtgatgatcagagtgac
tcgttacattacagaactgctaatccttcaagcgggtatagttcaaagccgcagtcaagg
tctattgccgccaacaagtatgcaagtcggaagtcaaaagcttcaaaagatcagtacggc
ggcgagtatgctgattatgacgatgatgatagtgaagatgaagatgatcccgatgatcct
gactatggtagcacaggtcgtggaaggggcattaaggaaaaggatgaagactgggagggc
ggagagtctgatgagttaaacagtgatgatgatgatgtgggcatctctgatgaagatgaa
gaatatttcagaaaacctcagggcaagcaaaagaataggggcgggcatagtgtaaaatct
accagagaaattaggtctcttgctacatctgctcgacgaaaaaggggtagaacatcattt
gaagaggaagaatcatcagaacatgattctgaaaatgagagtgatgaggattttggaagt
aaacctagaagagttgcaaatctccgcccgaaaaatggtggtagatctactgcggcaagt
gtatctgggaggaataatgaactccgaacttcgagtcgtcgatcgattcggaaagtatca
tacgctgagagtgacgaaagtgaagaaattgatgagagcaagaaaaagaagagccaaaag
gaagaaattgaagaggaagatggtgactcaattgagaaagtcctgtggcatcagccaaag
ggcatggctgaagaagctagaaggaataacaaatcagctgatcctatgttgttaagtcat
ttgtatgactctgaaccagattggaatgagatggagttcttaataaaatggaaaggccaa
tctcatttgcattgtcaatggaagtcgtttgttgagctacaacatcttagtgggtttaag
aaggtattgaattacaccaaaagggtcatggaggatgtgaagtatcggaagactgtatcc
cgtgaggagatcgaggtaaatgacgtgagcaaggaaatggacttggatatcatcaaacag
aacagccaggttgagagagttatcgcagacagaatcagcaaagatggttatggtaacgtg
gtgccggagtatttagttaaatggaaagggctatcttatgccgaagcaacttgggagaag
gatgttgatattgcttttgctcaagatgccatcgatgagtacaaggctcgtgaggctgcc
gctatggtacaagggaaatcagtggatttccagcggaaaaagagcagaggaagtttaagg
aagcttgaagagcagcctgaatggttaaagggtgggaaacttcgagattatcagcttgaa
ggcttgaattttctggttaacagttggaggaatgatactaatgttatattagctgatgaa
atgggtctgggtaaaactgttcagtcagtttcaatgctcggttttctacagaatgctcag
caaattcatggaccatttctggttgttgtcccattatcaactctctccaattgggcaaag
gagtttaggaaatggctgcctgatgtgaatgtgattgtctatgttggagcacgtgcaagt
cgtgaggtctgtcaacaatatgaattctacaatgataagaaagctggcaggactatcaaa
tttgatgcgctgcttaccacttatgaggtactattgaaggacaaggcagtgctttcaaag
ataaggtggaattacctaatggttgatgaagcacataggttaaagaatagtgaggcttct
ctttatacaacgctgttggagtttagcacaaaaaacaagctgctcatcactggtactcca
ttgcagaacagtgttgaagaactatgggccttactccacttccttgatcctgataagttc
aagagcaaggatgattttgttcagaattataagaatcttagttcgtttaatgaaatggag
cttgcaaatcttcacaaggaattgaggcctcacattctcaggaggatcataaaagatgtg
gagaagtcacttcctcctaagattgaacgaattcttagggttgagatgtcaccgcttcag
aaacagtattacaaatggatcttggaacggaattttcatgatttgaataaaggtgtccgc
gggaatcaggtttcacttttaaatattgtggtggagttgaagaaatgttgcaatcaccca
tttttatttgaaagtgcggaccatgggtatggcggggatgcatttggcagcacaaaattg
gaaagaattatactcagcagtggtaagcttgttatactcgacaagctgctggacagattg
catgagacgaagcaccgagtgttgatattttctcagatggttaggatgctggatatactg
gcagaatatttgtctatcaaagggttccaatatcagcggcttgatggtagtactaaggct
gagttacgtcatcaggctatggaccactttaatgcacctggtagtgaagacttctgtttt
cttctctcgacacgagctggtggattgggtataaatcttgcaacagcagacacagtcatc
atttttgattccgattggaatccccaaaatgacttgcaggcaatgagtagagctcatagg
atagggcagcaagaagttgtcaacatctacagatttgttacaagtaaaagtgtggaggaa
gatattctggaacgggctaagaagaagatggttcttgaccatctggtgattcagaaactg
aatgctgagggtaaattagagaagaaagaaaccaagaaaggaagtctctttgataagaat
gagctctctgcaatcttgaggtttggggctgaggaactatttaaggaagacaagaatgat
gaagagagcaagaagaggcttcttagtatggatattgatgaaattcttgaacgggctgaa
aaggttgaagagaaagcagctgaggcagaggaaggaaatgagttactgagtgctttcaag
gttgccaatttctgtggtgctgaagatgatgcatctttttggagtcggtggataaagcca
gatgctgttggacaagctgaagagtctttggctcctcgagctgctcgaaatataaagagt
tatgcagaagctagccctctggtagaaactaataaaagaaagaagggtgttgatgctcag
gaaaggttcccaaaacgtcgcaagggagattctagctgcacgcttccggcaatcgatggt
gctaccgctcaagtgagaggatggtcttacgggaacttgccaaagagagacgccactcgt
ttttcccgtgcggtcaagaagtttgggaatgatagccaaattggcttaatatcagcagag
gttggtggggcagttgaagcggcgccaactgatgctcaagttgagctttttgactcatta
attgatggttgcagagaagcagttaaaggtgaagttgttgacccaaaggggccactttta
gatttttttggtgttcctgtgaaggctgatgaactactgggccgtgtcgaggaacttcaa
ctcctagcaaagcgtatttgtcggtatgaggatcccgtctcacagttccgtgctttatct
tatctaaaacctgcaacttggtctaaaggttgcggctggaaccagaaggatgatgccagg
ctgcttttgggaattcattatcacggatttggcaattgggaaaagatacggttagatgaa
aaactgggcctcatgaagaagattgctccagtggaacttcaacatcatgagactttcttg
ccaagagctccgcagttgaaggagagagcttctcaacttctgcaaatgtcttgccaccag
gaagttgcagctgttggtgggaagagcattaattcaaaagtgggccgaaaagcttccaac
aagcagaaggaaagccttcccagcatcacagcacctcttggaaagggtaaacatggtaaa
ctaagctcagccggattaaatgttaaagcaggtaaagttagagcttcaaaagcccagaag
gttgaacctttggttaaagaggaaggggaaatgtcagacaatgatgaagtttatgagcag
tttaaagaggtgaaatggatggaatggtgccaagatgtgatggcagatgaggaaaagacg
cttaagcgtctgcaaagattgcagactactagtgctgatctcccgaaggacaaggtgtta
gccaaaatacggaactacttgcaacttcttggtcgcaggattgatcaaatagttatcgaa
tatgagaaggaaccgtataagcaagaaaggatgacagtgcgtttatggaattatgtatca
acattctcaaatttgtctggcgagaaactccgtcagatttattctaaacttaaacaggag
caacacgtagaagcaagggtaggaccttcacaatttaatggttctgcacccgggcatcca
acgccagggtttataccccgaggtttagatgtggcaaaatttgaagcatggaaacgaagg
aaaagagctgaagctgatggtcattcccaagttcagccccaacagcaaagacctttgact
aatgggacacgcctatctgaaccgaactcatcttcagggattcttggcgcagctccttca
gatagcaaacagttgggtaatggtaggccttacagaacacatcagtctggccttccccaa
agaccaggtttctcgtccggtcccagatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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