KEGG   Nicotiana sylvestris (wood tobacco): 104217395
Entry
104217395         CDS       T05026                                 
Name
(RefSeq) dicer-like protein 4 isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsy03036]
    104217395
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    104217395
   microRNA pathway
    RISC loading complex
     104217395
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD Helicase_C ResIII DND1_DSRM dsrm PAZ IstB_IS21
Other DBs
NCBI-GeneID: 104217395
NCBI-ProteinID: XP_009765934
UniProt: A0A1U7VU57
Position
Unknown
AA seq 1624 aa
MEGGDFENGTESPPSAATSPITEQLSALSLNGDIDSPVSVQKPEKDPRKIARKYQMDLCK
KALEENVVVYLGTGCGKTHIAVLLIYEMGQLIRKPQKSICVFLAPTVALVQQQAKVIEDS
IDFKVGTYCGKSKHLKSHEDWEKEMEQYEVLVMTPQILLHNLSHCYIRIEFIALLIFDEC
HYAQVESDHPYAEIMKIFYKPDVVKLPRILGMTASPISGKGATVEGLETLLRSKVYSVED
KDELEQFVASPKVNVYYYGPGAACLTKAYSQKLEEIKHQCVMVLHKKAVDHSTLRNTKKM
LKRLHGHLIFSLENLGVFGALQASCILLKGDHYERHQMVEADVNASDDSLCDRYLSQVAT
MFTSGCAKDGMNPDLTLVEVLKEPYFSKKLLRLIGILSNFGVQPDMKCIIFVNRIVTARS
LSYMLQHLKVLSSWKCGFLVGVHSGLKSMSRKNTNIILNKFRSGELNLLVATKVGEEGLD
IQTCCLVIRFDLPETVASFIQSRGRARMPKSEYAFLVDSDNQRELNLIEHFSRNEARMND
EISSKKSCSTVIDFQENIYKVDMTGATISSASSISLLHHYCSKLPRDEFFCPKPQFFYFD
DIDGTICKLVLPSNAPMHQIVSAPQSSIEAAKKDACLRACKSLHELGALTDYLLPDQADE
DLIHVFSDSESSDGEDAREELHEMIVPAAFKEPWTETESPVCLNSYYINFSPCPIDRVYK
KFGLFLKAPLPQEAERMKLNLNLARGRSVETELIPSGATNFENNEQVQLAEKFQRMFLKI
ILDRSEFISEFVSLEKQDYVDSASKSYLLLPLNLCGHNKISVDWELVRRCLSSPIFGTSV
YAGNSEISKFDEQLQLANGSKSVHDVANSLVYVPCKDTFFFISDVVKESNAYSIYKDSKN
HVKHYYDTFGIHLSYPEQPLIKAKQLFCLDNLLRKKGYSELRDKEEHFVELPAEICQLKI
IGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGREVTIDHVLEALTTEKCNE
PFSLERLEVLGDAFLKFAVGRHVFLTYDAFDEGQLTRRRSNIVNNSYLYTIAVRNNLQAF
IRDQSFDPNHFYAVGRPCPVICDKQTEKNIHGQCGSVTDGAKTEVRCSKCHQWLRKKTIA
DIVEALVGAFIVDSGFKAAIAFLKWIGIYTDFEESQVKSICAASKVFMPLADEIDIPAIE
NLLGYPFVHKGLLIQAFIHPSYNNHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQ
LTDLRSVSVNNNTFAVVAVHQSFHSHILCDYSSGLRESITRYVNFIGRPDSMKRLAEEPS
CPKALGDLVESCMGAILLDTGFDLNRAWHIMLSFLKPVMSFTRLQLNPKRELHELCQSYG
WHLKFLASKKDSKYLVEAKVNGENVSEAASALNINKKAAARMAAQQVHSSLKAQGYRRKS
KSLEQVVKTAKKMEAKLIGYDEIPCVLTARCNDVEKNEASESDRDLKAFPISEQLARNCN
FKLKPARKLAPEAAVQCNSEQTIMPNGSNSDSKATGGAINGSAKSILHEVCAANCWKPPR
FECCKETGPSHLKEFTFRVVVEIEETSRVIESCGAPRAKKKDAAEDAAEGALWFLKHEGY
MFDN
NT seq 4875 nt   +upstreamnt  +downstreamnt
atggaaggcggcgactttgagaacggcactgagagtccaccaagtgctgcaacttcaccg
atcactgagcagctttctgctctgtctctcaatggcgacatagattctcctgtttcagtt
cagaaaccagagaaagaccccagaaaaattgctagaaagtatcagatggatctttgtaaa
aaagcattagaggagaatgttgttgtatatctgggaacgggctgtgggaaaactcatatt
gccgtcttgcttatctatgagatgggacagctgattaggaaaccccagaagagcatttgc
gtgtttcttgctcccactgtggcgttggtgcaacagcaagccaaggtcatagaagactct
attgacttcaaagttgggacatactgcgggaaatccaagcatttgaagagccacgaagac
tgggaaaaagaaatggaacagtatgaggtccttgttatgacccctcaaatactattacat
aatctttcccactgctatatcaggattgaatttattgctcttctgatctttgatgagtgc
cactatgcacaagttgagagtgatcatccttatgctgagattatgaagatattttacaaa
cctgatgtagtaaaactgccccgtatacttggcatgactgcatctccaatatcaggaaaa
ggtgctactgttgaaggccttgagaccttacttcgctctaaggtgtattctgttgaagac
aaggatgaactggaacagtttgttgcatcacctaaggtgaatgtatactactatggtcct
ggcgccgcgtgtcttactaaagcttactctcagaagcttgaagagataaaacaccagtgt
gtgatggtgcttcacaagaaagcagttgatcatagcacactcaggaacacaaaaaagatg
ctcaagagattgcatggacatctaattttttctctggaaaacctaggtgtctttggggca
ttacaggctagttgcatcctcttaaagggggatcactatgagcgccatcaaatggtggaa
gctgatgttaatgctagtgatgactctttgtgtgacagatatctgagtcaggtcgccaca
atgtttacttctggttgtgctaaagatggtatgaatcctgatttgacacttgtggaagtt
ctgaaggagccttatttctccaaaaagcttttacgtctaattggaatcctttccaacttc
ggggtacaaccagatatgaagtgcataattttcgtcaataggatcgtgactgcgagatct
ctttcttatatgcttcagcatctgaaagttttatcttcttggaaatgcgggtttcttgta
ggagtgcactcaggattgaagagtatgtcacgaaaaaatacaaatatcattctcaataag
ttccgttctggtgagctcaacttattggttgccaccaaagttggcgaggaaggacttgat
atccagacatgctgccttgttatacgatttgatcttcctgaaactgttgccagttttata
cagtctagagggcgtgcccgcatgccaaagtctgaatatgcatttttggttgatagtgat
aaccaaagggagcttaatttgattgagcatttttcaagaaatgaagctcggatgaatgat
gagatttcttccaagaaatcttgctcgacagttatagattttcaagaaaatatatacaaa
gtagatatgactggtgcaaccatcagttctgcatcaagcatttcgttgcttcaccattat
tgttccaagcttccacgtgacgagtttttctgccccaagccgcagttcttctactttgat
gacatagatggaactatttgcaaattagttttgccttcaaacgctccaatgcatcaaatt
gtgagtgctcctcaatcttctatagaagcagctaagaaagatgcctgtttaagagcctgc
aagagcttgcatgaacttggagcactcactgattatcttttgccggatcaagcagatgaa
gacctgattcacgttttttctgactcagaaagctcagatggcgaagacgcacgagaagag
ctccatgagatgattgttcccgctgcctttaaagaaccatggactgagacagagagtcct
gtttgccttaactcgtactacatcaacttttcaccttgtccaattgatagggtttataaa
aagtttggcctatttttgaaagcacctcttccccaagaggctgagagaatgaaacttaat
ctcaacttggctcgaggtagatctgtagagacagagcttattccatcaggagctactaat
tttgagaacaatgagcaggtacaactagcagagaagttccagagaatgttcctcaagatc
attcttgaccgctctgagttcatttcagaattcgtatctttggaaaaacaagattatgtt
gactcagcttcaaaatcttacctacttcttccactcaatttatgtggacacaataaaatt
tccgtggactgggagcttgtcagaagatgcttgtcatcaccaatttttgggacttcagta
tatgcaggcaatagtgagatatccaaatttgatgagcagttgcaacttgccaatggttcc
aaaagcgtacatgatgttgccaatagtttggtatatgttccatgcaaggatacatttttc
ttcatatctgatgttgtcaaagaaagcaatgcatacagcatatataaagattcaaaaaac
catgtcaaacactattatgatacttttggtatccatctttcgtaccctgagcaaccacta
ataaaagcaaaacaactcttctgtttggacaacttgctacgaaagaaaggctattcagag
ttgcgtgataaagaggagcactttgttgaactacctgctgaaatttgccagctcaagata
attgggttttccaaagatattgggagctcattatcactgttgccatcgatcatgcatcgt
cttgaaagcctacttgtcgctattgaactaaagggctgcctatctgcttctttccctgag
ggaagggaagtaacaatcgatcatgttcttgaagcacttactacagagaaatgcaatgaa
cctttttctcttgaaaggcttgaagtgcttggtgatgcatttctcaagtttgcagttggg
aggcatgtctttcttacatacgatgcctttgacgaaggacagttaactagaaggcgctca
aacattgtgaacaattcctatctgtacacgatagcagtcagaaacaatttacaggcattt
attcgtgatcaatcatttgatcccaaccacttctatgcagtaggccgtccgtgccctgta
atctgtgacaaacaaacagaaaaaaacatacacggtcaatgtggtagtgtaacagatggt
gcaaagactgaagttaggtgtagcaaatgtcatcagtggttgcgtaagaaaacaattgct
gatatagttgaagcccttgttggcgcttttatagttgacagtggcttcaaagcagcaatt
gcatttcttaaatggattggtatctatacagatttcgaagaatcacaagtaaagagtatt
tgcgctgcaagcaaagtctttatgccacttgctgatgaaatagatattccggccattgaa
aatttattaggttatccattcgtccataagggtttgctcattcaggccttcatccatcca
tcttataacaaccacggaggaggttgctatcagagactggagtttcttggagatgctgtc
ctcgattatttgatcacatcctatctatactctgtgtacccaaaactgaagcctggccag
ttgactgatctgagatcagtttctgtaaacaacaacaccttcgcagttgttgcagtacat
caaagcttccacagccatatactctgtgattatagtagtggcctccgtgagtcaattact
agatatgtcaatttcattggaagaccagattctatgaaaaggttggctgaagagccatct
tgtccaaaggcccttggcgacctggtggagtcttgtatgggtgcaatcctgcttgacaca
gggtttgacttgaaccgtgcttggcatataatgctctccttcttaaagcccgtcatgagc
tttaccaggttgcagcttaatccaaaaagagaactccatgaactttgccagtcttatggc
tggcatctaaagttcctggcttcaaaaaaagatagcaaatatctagttgaggccaaggtg
aatggggagaatgtttctgaagcggcttctgctctcaatatcaataaaaaagctgccgca
agaatggctgcccagcaagtacattcaagcttgaaggctcaaggctataggcgcaagtct
aaatcactggagcaagtggtaaaaacagctaaaaagatggaagctaaactgataggatat
gatgaaataccctgtgttcttactgctaggtgcaatgacgtggagaagaacgaagcatct
gaaagtgatcgtgacttgaaagcatttcctattagtgagcaacttgcaagaaattgcaat
ttcaagttaaagcctgcgagaaagttggccccagaggcagctgtacaatgcaattctgag
cagaccatcatgcctaatggctctaattcagattcaaaagctacaggtggtgcaataaat
ggatcggcaaagtcaattttgcatgaagtttgtgctgccaactgctggaaacctcctaga
tttgaatgttgcaaggagacagggccaagccacttgaaagagtttacttttcgggtggtg
gtggaaattgaagaaacatcaagagttatagagtcttgtggagctcctcgggcgaaaaag
aaagatgcagctgaggatgcagcggaaggggcactttggttcttgaagcacgaaggatac
atgttcgataactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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