KEGG   Nicotiana sylvestris (wood tobacco): 104221961
Entry
104221961         CDS       T05026                                 
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    104221961
Enzymes [BR:nsy01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     104221961
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg CarbopepD_reg_2 RhgB_N
Other DBs
NCBI-GeneID: 104221961
NCBI-ProteinID: XP_009771422
UniProt: A0A1U7VU69
Position
Unknown
AA seq 682 aa
MRKMKKREWSSILGWLIIFLQLFLLAESALTREKINKKNSQLDEQSFPPVQLLRLDDYVV
VNNGIFNITFSIPGGMVTGIQYNGIENLLEDENEDDNRGYWDIVWNKPDKPGIFDKLHAT
DFNVIMADENQVELSFKRTWDSLNNSHLSMNIDKRFIIIRGSSGFYSYGILERLEGWPNI
DVYQGRIVFKLKEELFQYMAISDERQRIMPTAQDREMGQKLDYPEAVLLTNPTNSFIKGE
VDDKYQYSCENKDNRVHGWISPNPRTGFWMITPTDEFRTGGPLKQDLTSHTGPVNLNMFF
STHYAGESLGLKFRDGEPWKKVFGPVFTYLNSLSPDELDTLTLWTDAKEQMFIETENWPY
NFPLSEDFVRSDQRGIVTGRLLVRDSYESDKLITANSAFIGLAAPGDVGSWQMENKGYQF
WTQTDTEGYFLINNVITGNYSLYAWIPGFIGDYMHDAYINVNPGSRTRVETLVYDAPRNG
PTLWEIGIPERTASEFFIPDAQPRLLNQLYVVNNAERFRQYGLWDRYTEIYPDDDLVFTV
GLSNYQTDWFFAHVNRYIYNDDGNKTYVPTTWQVLFDLDDIDQSANYTLQLALASANDAE
LQVQFNDAEPDAPHYTTGLIGKDNAIARHGIHGLYRLYTINVPGSLLVFGTNVMYLKQTR
SERPWRGIMYDYIRLEGPPESY
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgagaaaaatgaagaagagagaatggagctctattcttggatggttgatcatttttctt
cagctatttttgttggctgaatctgcattaacaagagaaaaaataaataagaaaaacagc
caattagatgagcagtcttttccaccagtacaattgcttagactggatgattatgtggtg
gttaataatggaatattcaacatcactttctctattcctggaggaatggtcactggaata
caatacaatgggattgaaaatttattggaagatgaaaatgaagatgataatagagggtat
tgggatattgtttggaacaagccagataaaccaggaatttttgacaaacttcatgcaaca
gattttaatgttattatggcagatgaaaatcaagtggagctttcatttaaaaggacttgg
gattctttaaataattcacatctttccatgaatattgacaaaaggtttataataataaga
ggaagttctggattttactcttatgggattttagaacgtttggaaggatggccaaatatt
gatgtctaccaaggaagaattgtcttcaagctcaaagaagaattgttccaatatatggcg
atttcagatgaacggcaaaggattatgccaacggcccaagaccgtgaaatgggccaaaaa
cttgattatccagaagctgttcttcttacaaacccaactaattcttttattaaaggagag
gttgatgacaaatatcaatattcttgtgagaacaaggataatcgggttcatgggtggata
agcccaaatccacgaaccggattttggatgatcacaccaaccgatgagttcagaactggt
gggcctctcaaacaagaccttacttctcataccggcccagtaaacctcaatatgtttttt
agtacacattatgctggagagagtttgggactgaaatttagagatggagagccctggaaa
aaggtgtttggccctgtttttacatacctaaactcactttcacctgatgagctagacact
cttacactatggactgatgcaaaagaacaaatgttcatagaaactgaaaattggccatat
aattttcctctttcggaggattttgttcgatctgatcaacggggtattgtaaccggcaga
ttactcgttcgtgacagctatgaaagtgataagcttattactgcaaactcagctttcatt
ggattagctgctccaggagatgttggatcatggcaaatggaaaacaagggttatcagttt
tggactcaaacagataccgagggctatttcttgattaataatgtcatcactggaaattat
agcttgtatgcttggatccctggatttattggagattacatgcatgatgcatacatcaat
gtcaacccaggatcaagaacaagagtagaaactctcgtatacgatgcgccaaggaacggt
ccaacactctgggaaataggaattcctgaaaggactgcttctgaattcttcattcctgat
gcacaaccaagacttctgaaccaattatatgtcgtaaataatgcagaaaggttcaggcaa
tatggattatgggataggtatacagagatataccctgatgatgatttggtttttactgtt
ggattaagcaactatcaaacagattggttctttgctcatgtcaatcgatatatttacaat
gatgatggaaacaagacttatgtaccaactacatggcaagttctatttgatcttgatgat
attgatcaatcagcaaattatacccttcaactagcattagcctcagcaaatgatgctgaa
ctacaagttcaatttaatgatgcagaaccagatgctcctcactatacaacaggattgata
ggcaaagataacgcgatagctagacatgggattcatggattatacaggctatatactata
aatgttcctggttctcttcttgtatttggaaccaatgttatgtatctcaagcaaactaga
agtgaaaggccttggagaggaattatgtatgattatattcgtctcgaaggtcctcctgaa
agttattaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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