KEGG   Nicotiana sylvestris (wood tobacco): 104222317
Entry
104222317         CDS       T05026                                 
Name
(RefSeq) exopolygalacturonase clone GBGE184
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040  Pentose and glucuronate interconversions
nsy01100  Metabolic pathways
Module
nsy_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    104222317
Enzymes [BR:nsy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     104222317
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix NosD
Other DBs
NCBI-GeneID: 104222317
NCBI-ProteinID: XP_009771846
UniProt: A0A1U7W3Q9
Position
Unknown
AA seq 401 aa
MAIPKELLVLLLGIAILSKVAECASFGSRRGLVETVFDVTRFGARPNTPADSTRGLMMAW
RSACQSPGPAKVVIPPGTFTTGEIIFQGPCTSPRPITIEIQGTLLSNTDMSLYTRSAWIS
IEHVDGIVITGGGTLNGQGKSCWQFADKSGSTPPLPSSLVFQTVRSSSIKNLNFVDAKGV
HLKITDSSDISVSNVKITAPGDSPNTDGLHISETINVNVTDSTIRTGDDCISIGDGNSNV
YISNINCGPGHGISIGSLGKRLDETDVKGVTVRNCTFRGTTNGARIKTYMGSPSLQVSGV
IYEDIILDNVKNPIVIDQHYHSKNRNEPSRVKLVDIHFKNIRGTTTSKIPVALNCSEALP
CEGIELVDIDLVPVGSIGPLLPATCQNAKTILNGKNNPPAC
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggctattccaaaagaattattggttttacttttgggtatagccattttgtcaaaagtt
gctgaatgtgcatcttttggttcacgtcgtggccttgtagagacagtttttgatgttaca
aggtttggagctagaccaaatacccctgcagatagcactaggggacttatgatggcatgg
agatcagcttgccaatcaccaggaccagccaaagttgttattcctccaggaacatttact
acaggagaaattatatttcaaggaccatgcacaagtcctaggccaataactattgaaatt
caaggaactttgttgtcaaatactgacatgagtttgtacacaagatcagcttggatttct
atcgaacatgttgatggtattgttattactggtggaggaactctcaatggacaaggaaaa
tcctgttggcaatttgctgataaatctggaagtactcctcctctcccctcatctcttgta
tttcagacagtgcgaagttcttcgatcaagaacctaaattttgtagatgctaaaggtgtc
cacttgaaaatcactgatagcagtgatatatcagtttcaaatgtcaaaattacagctcca
ggagatagtccaaacactgatggtcttcatattagtgaaacaattaatgtcaatgtcact
gatagcaccattagaacaggtgacgattgcattagtattggagatggcaattctaatgtt
tatatctctaacataaattgtggcccaggacatggtataagtattggcagccttgggaaa
agattagatgaaacagatgttaaaggagttacagtaagaaattgtacattccgtggtaca
acaaatggtgcaagaatcaaaacttatatgggttcaccttcactacaagtttctggtgtt
atttatgaagatataatcctggataatgttaaaaatccaatcgttattgatcaacactat
cattccaagaacaggaatgagccatctagagtgaaactggtggatattcacttcaagaac
ataaggggaacaacaacttcaaaaattccagtggcactcaattgcagtgaagcacttcca
tgtgaaggaattgaattggttgacattgatctagttccagttggttcaattggacctctt
ttgcctgcaacttgtcaaaatgccaaaacaatattgaatgggaaaaataacccaccagca
tgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system