KEGG   Nicotiana sylvestris (wood tobacco): 104232818
Entry
104232818         CDS       T05026                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018  RNA degradation
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104232818
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104232818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104232818
   03041 Spliceosome [BR:nsy03041]
    104232818
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104232818
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104232818
Spliceosome [BR:nsy03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    104232818
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 104232818
NCBI-ProteinID: XP_009784403
UniProt: A0A1U7X0P4
Position
Unknown
AA seq 88 aa
MSSNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITPEG
KRVTKLDQILLNGNNIAILVPGGSPESE
NT seq 267 nt   +upstreamnt  +downstreamnt
atgtcttcaaacaacccttctcagcttcttccatctgagttgattgatcgttgcattggg
tcaaagatatgggtgataatgaagggggataaggagctagttggtacccttagaggattt
gatgtttatgttaatatggttcttgaagatgtcactgaatatgagatcactccagaaggg
aagcgagtaacaaaacttgatcagattctgcttaatggaaacaatattgctatcctggtt
cctggtgggtcacctgaatctgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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