KEGG   Nicotiana sylvestris (wood tobacco): 104233037
Entry
104233037         CDS       T05026                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020  RNA polymerase
nsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104233037
  09124 Replication and repair
   03420 Nucleotide excision repair
    104233037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsy03021]
    104233037
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104233037
Transcription machinery [BR:nsy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     104233037
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104233037
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L Tup_N VirK
Other DBs
NCBI-GeneID: 104233037
NCBI-ProteinID: XP_009784647
UniProt: A0A1U7WXJ7
Position
Unknown
AA seq 116 aa
MNAPDRYERFVVPEGVKKVSYDRDTKIINAATFTVEREEHTIGNILRMQLHRDDNVLFAG
YKLPHPLQYKILLRIQTTSQSSPMQAYNQAINDLDKELDHLKNQFEGELAKHSREY
NT seq 351 nt   +upstreamnt  +downstreamnt
atgaatgctccggatcgttacgaacgattcgtcgttccagagggcgttaagaaggtttca
tacgacagagatacaaagatcataaatgcagctacattcaccgttgaaagagaggaacac
actatcggcaacattcttcgcatgcaactgcatagggatgacaatgtactattcgctggg
tataagttgcctcatcctcttcagtacaaaatcttgctcaggattcaaacaacaagtcag
tcctcacctatgcaggcatataaccaggccataaatgatcttgataaggaacttgatcat
ctgaagaatcagttcgagggcgagttggccaagcactcgagggaatactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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