KEGG   Nicotiana sylvestris (wood tobacco): 104234540
Entry
104234540         CDS       T05026                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
  KO
K15685  E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104234540
   04131 Membrane trafficking [BR:nsy04131]
    104234540
   04121 Ubiquitin system [BR:nsy04121]
    104234540
Enzymes [BR:nsy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104234540
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    N6-methyltransferase complex
     104234540
Membrane trafficking [BR:nsy04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    104234540
Ubiquitin system [BR:nsy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104234540
SSDB
Motif
Pfam: zf-C3HC4_3 zf-RING_UBOX zf-C3HC4
Other DBs
NCBI-GeneID: 104234540
NCBI-ProteinID: XP_009786415
UniProt: A0A1U7X9T7
Position
Unknown
AA seq 497 aa
MLQIRLSKPASESGGGAKSLPSDSITVACPDHLVLADLPVAKSLGSANAASLLKTVGRRS
RRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSLCYLCDERIQKIQTIKLMEG
IFICAAPHCLKSFLKKTEFESHIHENHGDLLHQTAEKDGNVSESASARKPAASDSTVQAP
PRPLFSPSSGSQVHDREDKSHHSQTRDQQPPRLVMQPKPTPPFAGSIQNHPLEQQSDSNP
PPGFERPGSQNRFPQQGFDTQGALRPEPGQFPDKQQGIIGGSPFPEYPMHMSQPHGFAVP
MSSNPVLAPQFGYPQFAPDGAQPFYGAPFEMPRPDSTPEMGSEQGSLLGFPPGAAGSMNF
AENYPRPWNMGQQVGPFERSAVQPPGDGFVNAADPQGRPVFFQGDYGRNAGIMPSNLPPP
PSANRGSEGGQSGNSMDNRDSKGILMPQPMTLPPPPPLPHPMSQLQRGGRHYSDASHDGQ
GFGWQHEKRDSYGSSQD
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgcttcagatcaggctaagcaaaccagccagtgagagtggtggaggtgctaagtctttg
ccttcggacagtattacagttgcttgtcctgatcaccttgttttagctgatcttcctgta
gccaagagccttggttcagcaaatgctgcttctctgctcaagactgttggccgccggtcc
cgtcgccagcttggtgaacgagtacatttttgtgtccgttgtgactttccaattgctatt
tatggacgtctgagcccatgtgaacatgccttctgcttagattgtgccaggagtgattct
ctctgctacctctgcgatgaacgcattcagaagattcagacaattaaattgatggaaggg
atcttcatctgtgcagctccgcattgtctcaagtcctttctgaagaagactgaatttgaa
tctcatattcatgagaatcacggtgatctccttcatcaaactgcagaaaaagatggaaat
gtttcggagtctgccagtgctagaaaacctgcagcctctgattctacagtgcaagcaccg
cctaggcccctattttctcctagttcaggttcccaggtacatgatcgtgaagacaaatct
catcattctcaaactagagaccaacagcctcctaggcttgtcatgcaaccaaagccaaca
ccacctttcgctgggtcaatccaaaatcatccattagagcaacagtctgatagtaatcct
cctccgggctttgaaaggcccggcagccagaaccggtttccccaacaaggttttgacaca
cagggcgcattgcggccagagccaggtcagtttccagacaagcaacaagggattataggg
ggttcccctttccctgaatatcctatgcacatgtcccaacctcatggctttgcagtgcct
atgagttcgaatccagttttggctcctcaatttggttatcctcagtttgcacccgatgga
gctcaaccattttatggtgccccgtttgagatgcctaggccagactcaactcctgaaatg
ggatcagaacaagggtctttgctaggttttccacccggcgctgcaggaagtatgaatttt
gcagaaaattaccctcggccatggaatatggggcagcaggttgggccttttgagcgctct
gcagttcaacctcctggggatggttttgtaaatgccgctgatcctcaaggaagacccgta
tttttccaaggagactatggaaggaatgccggtataatgccctcaaacctgccacctcca
ccttcagccaaccgaggatcggaaggtggacagagtggaaattcaatggacaacagagat
agcaagggtatattgatgccacaacctatgacccttccaccacccccacctttaccacat
cccatgtcacaacttcaaagaggaggcaggcactactctgatgctagtcatgatggacag
ggctttggttggcaacacgagaagcgtgatagttatggaagcagccaggactag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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