KEGG   Nicotiana sylvestris (wood tobacco): 104235241
Entry
104235241         CDS       T05026                                 
Name
(RefSeq) DNA repair helicase UVH6
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03022  Basal transcription factors
nsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104235241
  09124 Replication and repair
   03420 Nucleotide excision repair
    104235241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsy03021]
    104235241
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104235241
Enzymes [BR:nsy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     104235241
Transcription machinery [BR:nsy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     104235241
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     104235241
SSDB
Motif
Pfam: DEAD_2 HBB Helicase_C_2 ResIII DEAD SNF2-rel_dom AAA_11
Other DBs
NCBI-GeneID: 104235241
NCBI-ProteinID: XP_009787262
UniProt: A0A1U7XJY7
Position
Unknown
AA seq 758 aa
MKFQLEDITVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR
LSKPSSPIKLLYCTRTVHEMEKTLAELKLLYNYQLQQFGPGARMLAIGLSSRKNLCVNPN
VVSAENRDSVDAGCRKLTASWVRALAIENPNVPTCSFFENYDAADKAGTSTLPAGVYTLQ
ELRMYGKEKGWCPYFLARHMVQQANVVVYSYQYLLDPKVAGIISKEMERECVVVFDEAHN
IDNVCIEALSVSVRKQTLEGATRNLSRMSQEIERLKATDAGRLRAEYNRLVEGLAQRLPA
QDVWLANPALPDDIMKEAVPGNIRRAEHFLSVLRRFVQYLKGRLDTENVEKEGPVAFVAS
ITTQVGIDQKMLKFCYDRLHSLMLTLEITDTDEFLHVQTICDLATLVGTYSRGFSIIIEP
FDERMPHIPDPVLQLTCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS
FKMSLTRDCICPMVLTRGSDQLPVSTKYDLRSDPGVEKNYGKLLLEMVSVVPDGVVCFFV
SYSYMDGIVNSWHESGILKDIMQHKLVFIETQDVVETTLALDNYRRACDSGRGAVFFSVA
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAVYIAKEF
LRKMAQPYDKNGALGKKTLLSQEDLENMITGPDGEMLL
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgaaattccaattagaagacataacagtgtacttcccatatgacaacatatacccagaa
caatactcatacatgttagaactcaaaagagctttagatgcaaaaggccattgtcttctt
gaaatgccaacaggaactggaaaaaccatagctttactttctttaatcacaagttacaga
ctttcaaaaccctcaagcccaattaagcttctttattgtacaagaactgtacatgagatg
gaaaaaacattagctgagcttaaattattgtataattatcagttacagcagttcgggccg
ggggcccgaatgctggcaatcgggctttcatctaggaagaatttgtgtgtgaacccaaat
gtggtttctgctgagaatagggattctgttgatgctggttgtaggaaattgactgctagt
tgggttagagcacttgctattgaaaaccctaatgttccaacttgttcattttttgagaat
tatgatgctgctgataaggctggtacttccactttgcctgctggtgtttatactttgcag
gagttaaggatgtacggtaaggaaaaaggttggtgcccatactttttagcgcggcatatg
gtgcagcaggcaaatgttgtggtttatagctaccaatacctgcttgatcccaaggttgct
ggtattatatcaaaggagatggagagagagtgtgttgtggtgtttgatgaggcccataat
atagacaatgtatgcattgaggcacttagtgttagtgtgaggaagcagacgcttgaaggg
gcaacaaggaatctcagtaggatgtctcaggaaattgaaaggctgaaggccactgatgct
ggtcgattgcgagcagagtataatcgtcttgttgagggtctagcacaaagactgcctgct
caggatgtatggcttgctaatcctgccttgcctgatgacatcatgaaggaagcggtgcct
ggaaatataaggcgagcggagcacttcttatctgttttgcgaagatttgtccagtatctt
aaagggcgtcttgacactgaaaatgtggaaaaggagggtcctgttgcctttgttgcttct
attactacacaagttggaatcgaccaaaagatgttaaaattttgttatgataggcttcac
tctcttatgttaaccctggagataactgatacagatgagtttctgcatgtgcaaactatt
tgtgaccttgcaacgttggtagggacgtactctcggggcttttcaattataattgaacct
tttgacgagagaatgccacatattcctgatcctgttcttcagcttacctgtcatgatgct
tctctcgccataaagcccgtttttgaacgattccagtctgttgttattacctccgggacc
cttagtcccattgatctctacccgcgtcttctcaatttcaatccggtagtcagtcgaagc
ttcaagatgtctttgacaagggattgcatatgcccaatggtccttacacggggaagtgat
cagcttccagtaagcacaaagtatgatctgagaagtgatcctggcgtcgagaaaaattat
gggaagcttttgctagaaatggtgtctgtcgttccagatggcgttgtctgtttctttgtc
agttactcttatatggatggaatcgtcaatagttggcatgaatcaggaatattaaaggat
ataatgcaacataaactcgtatttattgagacccaggatgttgtagagactacattggct
ttggataattatcgcagggcttgtgatagtgggaggggtgctgttttcttctcggttgct
aggggaaaagtagctgaaggtatagactttgatagacactacggcaggcttgtgatcatg
tttggtgttcctttccaatatacactaagcagaatattacttgcacgattggagtatctt
agggaaactttccagataaaagagggagattttcttacctttgatgctttgaggcaagct
gctcaatgtgtggggcgagttatccgttcaaaggcagattatggcatgatgatttttgct
gacaaaagatatagccgtcatgataagcggtctaagttgcctggatggatactttcgcat
ttacgggatgctcacttgaacttgagtacagacatggccgtgtatatagcaaaagagttc
ttgaggaaaatggctcagccatatgataagaacggtgcattgggcaagaaaactctattg
tcacaagaagacttggagaatatgatcactggccctgatggagagatgttgctttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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