KEGG   Nicotiana sylvestris (wood tobacco): 104241536
Entry
104241536         CDS       T05026                                 
Name
(RefSeq) endoribonuclease Dicer homolog 1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsy03036]
    104241536
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    104241536
   microRNA pathway
    RISC loading complex
     104241536
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer dsrm PAZ DND1_DSRM Helicase_C Dicer_dsRBD
Other DBs
NCBI-GeneID: 104241536
NCBI-ProteinID: XP_009794783
UniProt: A0A1U7XV10
Position
Unknown
AA seq 1178 aa
MNLLVATSVAEEGLDIRQCNVVIRFDLAKTILAYIQSRGRARKPGSDYILMVERDNLSHE
AFLRNARNSEETLRKEAIERTDISHLKGASKLISGEAPTDSVYQVESTGAVVSLNSAVGL
IHFYCSQLPSDRYSILRPEFIMKRHEKPGGPTEYSCRLQLPCNAPFEKLEGPVCSSMRLA
QQAVCLDACKKLHQMGAFTDMLLPDKGSGAELEKVEQDDEGDPIPGTSRHREFYPEGVAD
ILKGEWILSGKDSCDSSHLYMYAIKCVNIGTSKDPFLTDVSEFAILFGNELDAEVLSMSM
DLFIARTVETKATLVFRGPIEVTESQLASLKSFHVRMMSIVLDVDVEPSTTPWDPAKAYL
FAPVTGDESGDPIKDINWDLIKKITKTDVWSNPLQKARPDVYLGTSERALGGDRREYGFA
KLRHGMAFGLKSHPTYGVRGAIANFDVVKASGLVPHRSSLDLVEVDSSKDKIMMADCCLR
PEDIVGRIVTAAHSGKRFYVDCIPNDMTAENSFPRKEGYLGPLEYSSYAAYYKQKYGVDL
VYKKQPLLRGRGVSYCKNLLSPRFEHSEEHEGELEEATDKTYYVFLPPELCFLHPLPGSL
VRGAQRLPSIMRRVESMLLAVQLKDMIGYPVPALKILEALTAASCQETFCYERAELLGDA
YLKWVVSRYLFLKYPQKHEGQLTRMRQQLVSNMVLYQYALNKGLQSYIQADRFSPSRWAA
PGVLPVYDEDINEDESSIFGHEITENGTVAAKTLAADEFEDEEAEEGELDTDSGSYRVLS
SKTMADVVEALIGVYYVDGGKYAANHFMKWIGVEVDFDFKETEYSIRPYSIPENVLRSVD
FDKLQGALNISFNDKGLLLEAMTHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTD
LPPGRLTDLRAAAVNNENFARVAVKHGLHLHLRHGSSALEKQIRDFVSEVKNELSKPGFN
SFGLGDCKAPKVLGDIFESIAGAIFLDSGCDTAVVWKVFQPLLHPMVTPETLPMHPVREL
QERCQQQAQGLEYKASRSGNIATVEVYVDGIQVGMAQNPQKKMAQKLAARNALVVLKERE
EAEAKKAEDGKKKKNGNPSYTRQTLNDICLRRNWPMPLYRSVHEGGPAHAKRFTYGVRVN
TSDKGWTDECIGEPMPSVKKAKDSAASLLLELLNRWYS
NT seq 3537 nt   +upstreamnt  +downstreamnt
atgaatttgttagttgctactagtgttgctgaggaaggacttgacatacggcaatgcaat
gttgttatccggtttgacctggcgaaaactattttggcgtatatccagtctaggggccgt
gcccgtaagcctggatcagattatattttgatggtagagagagataatttgtcgcatgaa
gcatttctgaggaatgccagaaacagtgaagagacattgcggaaagaagcaattgagcgg
actgatattagtcatctcaaaggtgcctccaagttgatctctggggaggcaccaacagat
tcagtttatcaggtggagtccactggagctgttgtgagcttaaattctgctgttgggctg
atccacttctattgctcccagctaccaagtgacaggtactcaattctccgtcctgagttt
ataatgaagcgtcatgagaagccaggtggccctactgaatattcatgtaggcttcaactc
ccgtgcaatgcacctttcgagaaacttgagggccctgtgtgcagctcaatgcgccttgcc
cagcaggctgtttgtttggatgcttgcaagaagctccaccagatgggggcatttacggac
atgctcttgccagacaaaggaagtggggcggagttggagaaagttgaacaggatgatgaa
ggtgatccaattcccggaacttccaggcacagggaattttatcctgaaggtgtagctgat
attctcaagggtgaatggattttgtcggggaaggattcttgtgacagctctcacctctat
atgtatgctatcaaatgtgtgaatattggcacctcgaaggacccattcttaactgatgtg
tcagagtttgcaatactgtttggcaatgagctggatgcagaggtattatcgatgtcgatg
gatttatttattgctcggactgtagaaacaaaggcgactcttgtcttcagagggccaata
gaagttacagagtctcagttggcgtcccttaagagctttcatgtaagaatgatgagcatt
gtattggatgttgatgttgagccatccaccactccttgggaccctgcaaaggcatatcta
tttgcccctgttactggtgatgaatctggagatcctataaaagatatcaactgggatctt
attaaaaaaattactaaaactgatgtatggagcaatcctcttcagaaagctcgtccagat
gtatatcttggcaccagtgaacgtgctcttggtggagatcgaagggaatatggctttgcg
aaattgcgacatggtatggcatttggattgaagtctcatcctacatacggtgttagaggt
gctattgcaaactttgatgtggtcaaagcatctggattggtccctcaccggagtagcctt
gatttggttgaagttgattcgagtaaagacaagataatgatggctgactgttgtcttaga
ccagaagatattgtaggaagaattgtcactgcagctcattctggaaagagattttatgtt
gattgcattcccaatgatatgactgcagagaactcatttcctaggaaagaaggttaccta
ggtcctcttgagtacagcagttatgctgcttattacaagcaaaagtatggagttgatttg
gtctataaaaagcagcctctattaagaggccgtggtgtttcatattgcaagaaccttctg
tcaccacgatttgaacattcagaagaacacgagggtgaacttgaagaagctactgacaaa
acatattatgttttcctccctcctgagctctgctttttacatccacttccgggatccctt
gttcggggtgctcagagattgccctcgatcatgaggagggttgagagcatgctgcttgct
gttcagcttaaggatatgattggttaccctgtcccagcactgaagatcttggaagcattg
acagctgcttcctgccaagagactttctgctatgaaagagcagagcttcttggagatgcc
tatctaaaatgggttgttagtcggtatcttttccttaaatatccccagaaacatgaaggc
caactcaccaggatgagacaacaattggtaagcaacatggtattgtaccaatatgcctta
aataagggactccaatcatacatccaagcagatcgattttctccatcgaggtgggctgct
ccaggggtgttgcctgtgtatgacgaggacatcaatgaagacgaatcatccatatttggt
catgaaataacagaaaatgggactgtagcagcaaagactcttgctgctgatgagtttgaa
gatgaggaagctgaagaaggtgagcttgataccgattcaggttcgtatcgtgtactctct
agcaagacgatggctgatgttgtggaagcactgattggcgtatattatgttgatggtgga
aagtatgctgcaaaccatttcatgaaatggatcggggttgaggttgattttgacttcaaa
gagactgagtactctattaggccttatagcattcccgagaatgtactcaggagtgttgac
tttgataaattacaaggtgctctgaacatcagcttcaatgataaaggcctactgctagaa
gcaatgactcatgcttcacgcccgtcttctggggtctcctgttatcaaagactggagttt
gtgggtgatgcagtactagatcatctcatcacgaggcacttgttctttacatacacagat
cttccccctggccgattaaccgacttgagagctgcagctgtgaacaatgagaattttgca
cgtgttgcggttaaacatggccttcatttacaccttcgtcatggatccagtgccctagaa
aagcagattcgtgactttgtgagtgaggttaaaaatgaactatcgaaaccaggtttcaac
tcctttggtttaggggattgcaaagctcctaaagttcttggtgatatttttgaatcaatt
gctggggctatttttcttgacagtgggtgtgatactgcagttgtgtggaaggtttttcaa
ccattattgcatccaatggtcacaccagaaacactgccgatgcatccagttcgtgaacta
caagaacgttgtcaacaacaagctcaaggcttagagtacaaagcaagtcgaagtgggaat
atagctacagttgaagtatatgtggatggtattcaggttggaatggctcagaatcctcaa
aagaaaatggcacagaagttggctgccaggaatgcccttgttgtgttgaaagagagggag
gaagccgaagctaagaaggctgaagatgggaagaaaaagaagaacggaaacccgtcgtat
accaggcagacgttgaatgatatatgcttacgtagaaattggcctatgccactgtatcga
agtgtgcacgagggtggtccagcacatgcaaagaggtttacatatggtgtacgcgtaaat
acttcagacaaaggatggacagatgaatgtatcggagaacctatgccgagtgtaaagaaa
gccaaggattctgcagcatctctactactggaactcttgaatagatggtattcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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