KEGG   Nicotiana tabacum (common tobacco): 107769397
Entry
107769397         CDS       T04643                                 
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107769397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nta03009]
    107769397
Enzymes [BR:nta01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     107769397
Ribosome biogenesis [BR:nta03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    107769397
SSDB
Motif
Pfam: EMG1 NIF
Other DBs
NCBI-GeneID: 107769397
NCBI-ProteinID: XP_016444088
UniProt: A0A1S3XVX4
Position
Un
AA seq 194 aa
MRFFWYIHFFLNGGKRICGNEPRDSVKVVWEGSEPESCYNSHPYFLRAMLTILDSRVNKA
GRLKALYVKTEKGVLFEVKPHVRIPGTFKRFAGIMLQLRQKLSITAVGKREKLLRVIKNP
VSQYLHIDCRKIGFSHSSEKLVDIQDYINGINNDMNLVFVVRAMAHGKIEKDYVEDYLSC
KLIVPLFFFIFHQY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgagattcttttggtacattcatttctttctgaatggaggtaaaagaatctgtggtaat
gaacctagagatagcgtgaaagtggtatgggagggatcagaaccggaaagctgttataat
tctcatccatatttcctaagggcaatgcttacaatattagatagccgagtaaataaagct
ggacgattaaaagcgttgtatgtgaagactgaaaaaggtgtcctatttgaagtaaaacct
catgttcgtatccccgggacatttaagcgattcgctggtatcatgttgcagctgcgacaa
aagctgagcataactgctgttggtaagcgagagaaactgttacgtgttataaaaaaccct
gtctctcagtacctacacattgactgtcggaagataggcttctcacatagttctgagaaa
ctggtggatattcaagactacattaatggaattaacaatgacatgaaccttgtttttgtg
gtcagggcaatggcccatggaaaaattgaaaaagattatgtcgaagattatttatcatgt
aagctaattgttcctcttttcttttttatttttcatcaatactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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