KEGG   Nicotiana tabacum (common tobacco): 107777862
Entry
107777862         CDS       T04643                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04120  Ubiquitin mediated proteolysis
nta04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107777862
   04120 Ubiquitin mediated proteolysis
    107777862
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nta04121]
    107777862
Enzymes [BR:nta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107777862
Ubiquitin system [BR:nta04121]
 Ubiquitin ligases (E3)
  U-box type E3
   107777862
SSDB
Motif
Pfam: Ufd2P_core U-box DUF2730
Other DBs
NCBI-GeneID: 107777862
NCBI-ProteinID: XP_016453506
UniProt: A0A1S3YMJ6
Position
Un
AA seq 1040 aa
MATTKPQRTPVEIEDIILRKILLVTLVDSMENDTRVVYLEMTAAEILSEGKELRLSRDLM
ERVLIDRLSGNFVSAEPPFQYLINCFRRAHEEGKKIVSMKDKNVRSEMELVVKQVKKLAV
SYCRIHLGNPDMFPNWDTAKSNVSPLLPLVFSEVSSSVDAFGGGGGSGGMTCPPGFLDEL
FKEGDFDSMDPILKQLYEDLRGTVLKVSALGNFQQPLRALLYLVKYPVGAKSLVNHPWWI
PKSVYLNGRVIEMTSILGPFFHVSALPDNTIFKSQPDVGQQCFSESATRRPADLLSSFTT
IKTVMNNLYDGLAEVLMSLLKNTVIRENVLEYLAAVINKNSSRAHLQVDPLSCASSGMFV
NLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLELRGLTALHASSEEVSEWINQNNPG
KVDVSKEGSDGENRLLASQEATSSGNDSGGPSSLHNSRPTSSSSEKAKYPFICECFFMTA
RVLNLGLLKAFSDFKHLVQDISRSEDHLSTMKTMLEQAPSPQLQQELSRLEKELELYSQE
KLCYEAQILRDGGLLQRALSFYRLMVVWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDAM
ELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTA
TSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRN
AWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQER
QERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITAPFLLPEMVERVASMLNYFLLQLV
GPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKENIFPAAITRDGRSYSDQIFSA
AADVLRRIGEDMRIIQEFIDLGAKAKVAASEAMDAEAALGDIPDEFLDPIQYTLMKDPVI
LPSSRITVDRPVIQRHLLSDSSDPFNRSHLTADMLIPDTELKAKIEEFIRSHELQKRGED
LNLQNTKTTIQTTDTSNLIE
NT seq 3123 nt   +upstreamnt  +downstreamnt
atggcgactactaaaccacagagaacgccggtggagatcgaggacataatacttcggaaa
atcctcctcgtaaccctagttgattcaatggaaaacgatacacgtgtcgtgtatttagag
atgacggcggcggagattttaagcgagggcaaagaattaaggttatctagggatttaatg
gagcgggttttaatcgatcgactttcaggtaattttgtatcggctgaacccccttttcag
tatttaatcaactgtttccgtagggcccacgaagagggcaagaaaattgtgtcgatgaag
gataaaaacgtcaggtctgagatggaattagtggttaaacaagttaagaaacttgcggtt
tcttattgtaggatacatttagggaatcctgatatgtttcctaattgggatacagcgaaa
tcgaatgtatctcctttgcttcctttggtgttttcagaggtttcaagttctgtggatgcg
tttggtgggggtgggggtagtgggggaatgacatgtccacctgggtttttggatgagttg
tttaaagaaggggattttgatagtatggacccaattttaaagcagttgtatgaggattta
agagggactgtgttaaaggtttcagctttgggtaattttcagcagccacttagggcttta
ttgtacttggttaagtatccggtgggcgcaaagtcattggtgaatcatccttggtggatt
cctaagagtgtgtatttgaatggaagggttattgagatgacaagtattttgggtcctttc
tttcatgtcagtgctttgcctgataatacaatctttaagagtcagccggatgttggccag
caatgtttctcggaatcggcaacacggcgtcctgctgatctcctgtcttctttcacaaca
atcaaaactgttatgaataacttgtatgatggcttggcagaagtccttatgtctcttctg
aaaaatacagtcattcgtgaaaatgtccttgaatatctcgcagcagttataaacaaaaat
tcttcaagggctcatttacaggttgatccattatcttgtgctagttcaggcatgtttgta
aatctcagtgctgttatgcttcggctctgtgaacctttcttagacgccaatttgacgaaa
agggacaagattgatccccaatatgtgttttctagcacccgtctggaactgagggggttg
actgctctgcatgcatcatcagaagaagtttccgaatggataaatcaaaataatccaggg
aaagttgacgtctctaaagaaggcagtgatggagaaaatcggctgttggcatctcaggaa
gctacaagctccgggaatgattctggtggaccttcgagtctccacaatagcaggccaaca
tcaagtagtagtgaaaaagccaaatatcccttcatatgtgaatgcttcttcatgactgca
agggtgctcaacctgggcctcctaaaagcattttcagattttaagcatcttgttcaggac
atttcaagatccgaagatcatttgtctactatgaaaaccatgctagaacaagcaccctca
ccacagttgcagcaggaattatctcgcttggagaaagaacttgagctgtattcacaggag
aaattatgctatgaagcccaaatactgagggatggagggcttctccagcgtgcattatcc
ttctacaggttgatggtcgtttggctggttggccttgttggtggttttaagatgccttta
ccttccccttgccctatggagtttgcttctatgcctgagcactttgtggaagatgccatg
gagctgctaatttttgcctctcgaattcctagagctttggatggtgtcttactggatgac
ttcatgaatttcattatcatgttcatggcaagtccagaatatatcagaaacccttatctt
agagcaaagatggttgaagtcctaaactgttggatgccccgtagaagcggctcgactgca
acgtctactttgtttgaggggcatcaactctctctggagtatcttgtgaagaatcttttg
aaggtttatgtcgacattgaatttacaggttcccacactcagttctatgataaatttaat
atccgccacaacattgctgaactacttgaatatctttggcaagttcctagtcacaggaat
gcatggagacagattgccaaggaggaggagaagggtgtttatttgaatttcttaaacttc
ttgattaatgatagcatctatcttcttgatgaaagtcttaataaaattcttgaactaaaa
gagctggaagctgaaatgtctaatacagcagaatgggagcgaagaccagctcaagaaagg
caggagagaactcgcctgttccattcacaagagaatataattcgaattgatatgaagttg
gcaaatgaagatgtgagcctgctagcatttacttcagagcaaattaccgccccttttctt
cttcctgagatggtggagagagttgctagcatgttgaattactttttactacagctggtg
ggtccacaaagaaaatctctcagcttgaaagaccctgaaaagtatgagtttcgtccgaaa
gagttgttgaaacagattgtgaaaatatatgtgcatttggcgagaggggataaggagaat
atctttccagctgcaattacaagagatggtcgatcgtacagtgatcagatatttagtgct
gcagctgatgtccttagaagaattggtgaagatatgaggatcattcaagagttcattgac
cttggcgcaaaagccaaggttgcagcttcagaagcaatggacgctgaggctgcacttgga
gacattcctgatgaattccttgatcctatccaatatactttgatgaaggatcctgtcatt
cttccctcttcaagaataacagtggaccgacctgttattcagaggcaccttcttagtgat
agttcggacccgtttaaccggtctcatctaactgcggacatgctgattcctgacaccgag
ttgaaggcgaaaattgaagagttcattcggtcccatgaattgcagaagcgtggggaagat
ttgaatttgcaaaacacaaaaacaacaatacaaacaactgatacttcaaatttaattgag
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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