KEGG   Nicotiana tabacum (common tobacco): 107788286
Entry
107788286         CDS       T04643                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nta01009]
    107788286
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nta04131]
    107788286
Protein phosphatases and associated proteins [BR:nta01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107788286
Membrane trafficking [BR:nta04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    107788286
SSDB
Motif
Pfam: Vps54 Vps54_N Syndetin_C
Other DBs
NCBI-GeneID: 107788286
NCBI-ProteinID: XP_016465445
UniProt: A0A1S3ZLN3
Position
Un
AA seq 990 aa
MDLRPSPSSGRYESSSSTKKPYLSKSVSDANSHNQSLASILNNPHAGKSDGWWWPTSSSL
PVVPEFAPLNPLPKPGSDLTRTDFTPYIASFSDPFTRFHDIQTHTKSTLLLDDQNGENAL
VACLREVPSLYFKEDFQLEDGATFKSVTAENLVVQEKLSQYLDVVELHLVREISLRSSSF
FEAQGQLEDLNSKIVEGCKRIRELKETIRLLDTNLVGPARKLQELNLKRSDLVALQNKLN
LIIYVNQALSTLNLLVASADCAGALDVTDDLQHLLDGDELAGLHCFRHLRDELATSIDSI
NSILSAEFMRITIQEAGNMDAAITSKFKARATIAINGEGHEAKLDEEETSNFRDRLLPFV
IGLLRTAKLPAVLRIYRDTLTADMKTAIKTSVEELLRVLCAQPLDSDFVAGERVVDTDGG
SSSLASRLRSLPPESFVQLLKAIFMIVQAHLAQASEVKKTIEWIICHLDDHYAADSVAAA
IALGAAAAETASEADGQITTFSQFSPSSNFSRGFSIHEKGNDVTTMSHLSRNFRADILRE
NTEAVFAACDAAHGRWAKILGVRAPIHPKLRLQEFLNIYNITQEFITATEKIGGRLGYSI
RGTIQSQAKAFVDFQHDSRMAKLKAILDQENWAEIDVPDEFQTIVTSLFCPKSGTTGHGD
DDSAVTATSQTEVVQSSSDPSMVDAGVPNMSHNTEQSDSTSTHLDSTAQSNDTNSRDRGR
SNPRMLSFGGVSYHMVNCGLILVKMLSEYIDMNNSLTGLSSEVIHRVVDILKFFNTRTCQ
LVLGAGAMQVSGLKSITSKHLALTSQVISFTYTIIPEIKRILFLKVPETHKGLLMLEVDR
VAQDYKVHRDEIHSKLVQIMRERLLVHLRSLPQIVESWNRQEDTDSQPSQYARSITKEVG
LLQRVLSRTLHEVDVQAIFRQVVIIFHSQISEAFSRLDISSQQARQRTYRDVQHLLGCIR
SLPSDSKSNPPNWGQLDEFLAQNFCAEASQ
NT seq 2973 nt   +upstreamnt  +downstreamnt
atggatttaaggccttccccatcatcgggaaggtacgaaagtagtagcagtaccaaaaaa
ccatatttatccaaatcagtatccgatgccaatagccacaaccaaagtttagcatccatt
cttaacaatccacacgccggtaaatcagatggatggtggtggcccacttcctcatccctt
cccgtcgttcctgaattcgcaccactaaacccacttcctaaacccggatctgatttaacc
cgaaccgatttcaccccttacattgcctccttttccgacccttttacccgttttcacgat
atccaaacccacactaaatccaccctcctcctggacgatcaaaatggcgaaaatgctctc
gtagcgtgccttcgcgaagtgccctctttgtacttcaaggaagatttccagttagaggat
ggcgccacgtttaaatccgtgacggccgagaatttggttgtgcaagagaagttgtcgcag
tatttggatgtagtggaattgcacttggtcagggagatttcgttgcgttcgagctcattt
tttgaggcgcaggggcaactggaggatctgaattcaaagatcgttgaagggtgtaagaga
atcagggaattgaaagagacaataaggctgctggatactaatttggtggggcctgctaga
aagttgcaggagttgaatttaaagaggagtgatttggttgctcttcagaacaagctcaac
ctcattatatacgttaatcaagctttatcaactctcaatttgcttgttgcatctgcagat
tgtgctggagctttagatgtcacagatgatttgcaacatttattggatggagatgaactg
gctggtctacattgctttcgacaccttcgtgatgaattggccacttcaattgattctatc
aacagcattctttcagcagaatttatgcgtataactatacaagaagctggcaacatggat
gcggcaattacatcaaaatttaaagcgcgggcaaccattgccattaatggagaaggccat
gaagctaaattggatgaagaagaaacctcaaatttccgagaccggcttcttccatttgtt
attggattactaagaactgcaaagctccctgctgtgttgagaatataccgtgacactctt
acagctgatatgaaaactgccattaagacatcagttgaagagctgcttcgtgttctgtgt
gcccaacctttggattcagattttgttgcaggcgagcgagtggttgatacagatggtgga
agctcgtctcttgccagtagattaagaagcctgccaccagaaagttttgttcaacttttg
aaggctattttcatgatagtgcaggcccacttagcccaggcttctgaagttaagaaaaca
attgagtggattatctgccatcttgatgatcattatgctgctgactcagttgctgctgca
attgcacttggggcagcagctgcagaaactgctagtgaagctgatggtcagatcaccacc
ttttcacagttttctccctcaagcaacttttccaggggtttttcaatccacgagaagggc
aatgatgtgacaactatgtcacatttatcgagaaatttcagagctgatatactgagagag
aatacagaagctgtatttgcagcttgtgacgctgctcatggaagatgggccaagatcctt
ggagtacgtgctcctatccaccctaagttgaggttgcaggagttcctaaacatatataac
atcactcaggaatttattactgccactgagaagattggtggaaggttggggtatagtatc
cgtggaaccatacaatcacaggccaaggcatttgttgattttcaacatgattctcgaatg
gcaaagttgaaggctatacttgaccaggaaaactgggctgagattgatgtccccgatgag
tttcagaccatcgtcacatcactgttctgtcccaagtctgggaccactggacatggtgat
gacgattctgctgtcactgcaacaagccagactgaagtggtccaaagcagcagtgatcct
tccatggtggatgctggagttccaaatatgtctcataatacggagcagagtgattctact
tcaacacacctagatagtacagcacagagtaatgacacgaactcaagagaccgcggaaga
tctaatcctagaatgctttcctttgggggtgtttcatatcacatggtaaactgtggcttg
attttggtgaagatgttgtcagaatatattgacatgaataatagtttaaccggcctatca
tcagaagtcattcaccgtgttgttgatatcttgaagtttttcaatacgagaacttgtcaa
cttgtccttggagctggagccatgcaggtttcaggtttgaagtctattacttctaagcac
ttggctttgacaagccaagtcatcagtttcacatacactataattcctgaaatcaagagg
atactgtttctgaaagtgcctgagacacacaagggattgctaatgctggaggttgatcga
gtagcacaggactacaaagttcatcgtgatgaaatacattccaagttggtacagataatg
cgggaaagattgctggtacaccttcggagtttgccacaaattgttgagagttggaatagg
caggaagatactgactcacagccaagtcagtatgctcgttcaatcacaaaggaagtcggc
cttcttcaacgtgtgttatctcgaactctgcatgaggtagatgttcaagctattttcagg
caagtggttatcatctttcactcacaaatttcagaagcattctcacgattggatattagc
agtcaacaagctagacaaagaacgtatcgtgatgttcagcatctgcttggatgtatcaga
tcattgccttctgatagtaaatccaatcctcctaattgggggcaacttgatgagtttctg
gcacaaaatttctgtgcggaagcaagtcaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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