KEGG   Nicotiana tabacum (common tobacco): 107796049
Entry
107796049         CDS       T04643                                 
Name
(RefSeq) probable RNA-dependent RNA polymerase 5
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nta03036]
    107796049
Enzymes [BR:nta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     107796049
Chromosome and associated proteins [BR:nta03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     107796049
SSDB
Motif
Pfam: RdRP
Other DBs
NCBI-GeneID: 107796049
NCBI-ProteinID: XP_016474249
UniProt: A0A1S4ACA9
Position
Un
AA seq 1058 aa
MGDFYSYNNEVEEQEEVIKLPPSVEQMLNQICKNQRQNLPDEKVRRLLLSIGEEGSLDIL
SKISVCQIKKTLSGFIVFMAKKYYQSETQQFYQQQPTQVSSAESFFQSPQIQRISLSSPN
SYSSSVNFSPRNGPLFQATVHNNVGDGSDSPTSAPQMLSPPMSPERTIFQRDLYDPTPSE
FRNRAGIQGISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHF
ESCIWTKYGHLCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLG
DENILVVRFMEEAPRCPQEIVKNGILVGLRRYRFFVYKDDGKKKNSMDKEEKIDTVKCYF
VRMESLNPYENLTYILHNKIVHEARCRFMHVHMVPSMAKYMARFSLILSTTVKLQVDLNS
VNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLER
YPNGVELGESSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRGTIQIRPSM
IKVEADPKLSRARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPGEYFFDILNNTLEE
TQRLYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEERNGLKGG
KLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPVK
NLGDVVGNAKYGILFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRASRPWSRIHS
TPKTLHREPNDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLILRKNYTTEN
EETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKAEYISTSVLGEI
YDRVKSFKAEEAAAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESKNDL
ADEVVKKYKQLLYEATDMEESARSTSDIFNDALAIYRVTYDYAKAIGDVKKCGFAWKVAG
SALCRLHAELHAKEHNQKVMAVSSSILHKLLNLRNKEV
NT seq 3177 nt   +upstreamnt  +downstreamnt
atgggagatttttactcctacaacaatgaagtagaagaacaagaagaagtgattaaactt
ccaccatcagtagaacaaatgctaaaccaaatctgcaaaaatcagagacaaaatttacca
gatgaaaaagtacgaagactccttttatcaattggagaagaaggttcacttgatattttg
agtaaaatctcagtttgtcaaattaaaaaaacactcagtggatttattgtatttatggcg
aaaaaatattatcagtccgaaactcaacagttttatcagcagcagccaactcaagtttca
tctgctgaaagtttttttcagtctcctcaaattcaaaggatttctctttcttctccaaat
tcgtattcttcttcagtaaatttttctcctagaaatgggccgctttttcaggctactgtt
cacaataatgtcggtgatggatctgattctccaacatctgctccacaaatgctatcacct
ccaatgagtccagaaagaacaatctttcaaagagatctttatgatcctacgccatctgaa
tttagaaacagggccggcatacaaggaataagcgaacagttgctggcactcagtaatctt
gagttcaggaaattatttttgattctacactacattgggaggaggaagttggaggatgta
attatgcttcatgatgttggtgaaattttggatatgacatgtcaacctatggctcatttt
gagtcatgtatttggactaaatatggtcatctttgtgaaaatgttaaacgggtgcagtat
cttgattgggattccggaaggagtcatttctatcattgccatgtttattcggatggaagc
tatgcttttaagggtccttacctgaaagcagaaagaacccatctacaacagtcattagga
gatgaaaatatattggttgtcaggtttatggaagaagccccaaggtgtccacaagagatt
gttaagaatggaattcttgttggtttgaggcgctatcgcttttttgtttataaggatgac
gggaagaagaaaaattcaatggacaaagaggaaaagatcgatacagtcaaatgctacttt
gttcgaatggaatctcttaatccttatgaaaatttaacttacattttgcacaacaagata
gtccacgaagcaaggtgtcgtttcatgcatgtacatatggtccctagcatggctaaatac
atggccaggttctccctaattttatccacgacagtaaagcttcaagttgatctgaattca
gtgaatattgacagaattgaagatatatattgtcatgacaagaatggacgtactctctat
gacgaagatggaaaaccccttatacacacagatgggactggatatatttcggaagatttg
gcaagaaagtgtccacaagattttttcaatgtgaagtataagaatgccaagttagagaga
tatcccaatggtgttgaacttggggagagttcatccgagttgggagaggcagaattccag
agtggggaaccgcctttgttaatgcagtgccgtctattctacaatggtcttgctgtaaag
ggaacccttctagtcaatagaaagctgccacggggcacgattcagattaggccttcaatg
atcaaggttgaggctgacccaaaattgtcaagagctcgaatgtttaactcgctggaaata
gttacacctagttttaaacctcggaatacttatctatcaagaactcttattgctctgttg
acctatggaggtgttcccggagagtatttctttgatatactgaataacacattggaggag
acacaaaggttatactcagatgaggtgaccgcactaaaagttgcagcgaaccatagagat
cgtgatgatgcctctattgccacgggtatgataatggctggagtacctctctgtgaaccg
tatcttaggtgttgcttatcttccttggcaaaggaagaaagaaatggtctaaaaggagga
aaacttcctatctctgatactttctatctaatggggacagctgatcccacggatacttta
aatcctcatgaagtctgtgttattcttgaacatggacagatatctggagaggtactagta
tacaggaatcccggacttcactttggtgatatccacagactacttgctgtcccagtgaag
aacctcggtgacgtagttggaaatgctaaatatggaatattgttctcgactaaaggtcca
agatctgcggccactgaaattgctaatggcgattttgatggagataaatattgggtctct
caaaacccccagctgttaaaatattaccgtgcaagtagaccgtggagccgaatccattca
acaccaaagacattgcatagagagcccaacgacttctctgccgaggaaatggagcatgag
ctctttcagacattcctagaaactaggatgccaaactatagtatggctgacgcttcttct
agctggttggcgctcatggatagacttctgatattgaggaagaattacaccacagagaat
gaagagacaaagaccatgaaagaaaagttgtttgagttgactgatttgtattacgacgct
atagacgcccccaaaagtgggaataaggtctacatcccgaaaaggttgaaagtggataag
tttccacatttcttggaaaagaaagcagagtatatctctacttcagttttaggagaaatt
tatgacagggtcaagtcatttaaagctgaagaagcagctgcagtagaaatcaagaaactt
cctgcctttgaggtcaaaatccctgagacatgcttgaggttatgggaggaaaggtacaaa
aagtacagatttgagatgatgcaagcgttgaacaccagcagtgaatcgaaaaatgactta
gcggacgaggttgttaagaagtacaaacagctgctatatgaagcgacggatatggaggag
agtgcaaggagtacatcggacatatttaacgatgcacttgctatttatcgcgttacttat
gattatgcaaaggctatcggagacgtcaaaaaatgtggttttgcatggaaagttgcaggt
tcagccctttgtaggcttcatgctgagcttcatgcaaaagaacataaccaaaaagtcatg
gctgtgtcatcttctatattgcacaaattattgaacttgaggaacaaagaagtgtaa

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