KEGG   Nicotiana tabacum (common tobacco): 107804767
Entry
107804767         CDS       T04643                                 
Name
(RefSeq) dicer-like protein 4
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nta03036]
    107804767
Chromosome and associated proteins [BR:nta03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    107804767
   microRNA pathway
    RISC loading complex
     107804767
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD Helicase_C ResIII dsrm DND1_DSRM PAZ DUF6612 IstB_IS21
Other DBs
NCBI-GeneID: 107804767
NCBI-ProteinID: XP_016484183
UniProt: A0A1S4B5W1
Position
Un
AA seq 1609 aa
MEGGDFENDTESPRSAATSPITEQLSALSLNGDTDSPVSVQKPEKDPRKIARKYQMDLCK
KALEENVVVYLGTGCGKTHIAVLLIYEMGQLIRKPQKSICVFLAPTVALVQQQAKVIEDS
VDFKVGTYCGKSKHLKSHEDWEKEMEQYEVLVMTPQILLHNLSHCYIRIEFIALLIFDEC
HYAQVESDHPYAEIMKIFYKPDVVKLPRIFGMTASPISGKGATVEGLETLLRSKVYSVED
KDELEQFVASPKVNVYYYGPGTACLTKAYFQKLEEIKSQCVMVLHKKAADHSTLRNTKKM
LKRLHGHLIFSLENLGVFGALQASCILLKGDHYERHQMVEADVNASDDSLCDRYLSQVAA
VFTSGCANDGMNPDLAIVEVLKEPYFSKKLLRLIGILSNFGVQPDMKCIIFVNRIVTARS
LSYMLQHLKVLSSWKCGFLVGVHSGLKSMSRKNTDIILNKFRSGELNLLVATKVGEEGLD
IQTCCLVIRFDLPETVASFIQSRGRARMPKSEYAFLVDSDNQRELNLIEHFSRNEARMND
EISSRKSCTTVIDFQENIYKVDMTGATISSASSISLLHHYCSKLPRDEFFCPKPQFFYFD
DIDGTICKLVLPSNAPMHQIVSAPQSSIEAAKKDACLRACKSLHELGALTDYLLPDQADE
DEDLIHGFSDSESSDGEDAREELHEMIVPAAFKEPWTETESPVCLNSYYINFSPCPIDRV
YKKFGLFLKAPLPQEAERMKLDLNLARGRSVETELIPSGATNFENNEQVQLAEKFQRMFL
KIILDRSEFISEFVSLEKQDSVDSASKFYLLLPVNLCGHNKISIDWELVRRCLSSPIFGT
SVYAGNSEISKFDEQLQLANGSKSVHDVANSLVYVPCKDTFFFISDVVKESNAYSIYKDS
KNHVKHYYDTFGIHLSYPEQPLIKAKQLFCLDNLLRKKGYSELRDKEEHFVELPAEICQL
MIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGWLSASFPEGREVTIDHVLEALTTEKC
NEPFSLERLEVLGDAFLKFAVGRHVFLTYDAFDEGQLTRRRSNIVNNSYLYTIAVRNNLQ
AFIRDQSFDPNHFYVVGRPCPVICNKQTEKSIHGQCGSVTDGAKTEVRCSKCHQWLRKKT
IADIVEALVGAFVVDSGFKAAIAFLKCIGIYTDFEESQVKSICAASKVFMPLADEIDIPA
IENLLGYPFVHKGLLIQAFIHPSYNNHGGGCYQRLEFLGDAVLDYLITSYLYSVYPDLKP
GQLTDLRSVSVNNNTFAVVAVHQSFHSRILCDSSDLRESITRYVNFIGRPDSMKRLAEEP
SCPKALGDLVESCMGAILLDTGFDLNRAWHIMLSFLKPVMSFTRLQHNPKRELHELCQFH
GWHLKFLVSKKDSKYLVEANVSGKNVSEAASAPNINKKAAKRMAAQQVLSSLTAQGYRRK
SKSLEQVVKTAKKMEAKLIGYDETPCVLTARCNDVEKNEASESDRDLIVFPISEELARNC
NFKLKPARKLAPEAAVQCNSEQTIMPNGSNSDSKATGGAINGSAKSILHEVCAANCWKPP
RFECCKETGPSHLKDLWHLPXRAKKKDAAEDAAEGALWFLKQEGYMFNN
NT seq 4830 nt   +upstreamnt  +downstreamnt
atggaaggcggcgattttgagaacgacactgagagtccacgaagtgctgcaacttcaccg
atcactgagcagctttctgctctgtctctcaatggcgacacagattcccctgtttcagtt
cagaaaccagagaaagaccccagaaaaattgctagaaagtatcagatggatctttgtaaa
aaagcattagaggagaatgttgttgtatatctgggaacgggctgtgggaaaactcatatt
gccgtcttgcttatctatgagatgggacagctgataaggaaaccccagaagagcatttgc
gtgtttcttgctcccactgtggcgttggtgcaacagcaagccaaggtcatagaagactct
gtcgacttcaaagttgggacatactgcgggaaatccaagcatttgaagagccacgaagac
tgggaaaaagaaatggaacagtatgaggtccttgttatgacccctcaaatactattacat
aatctttcccactgctatatcaggattgaatttattgctcttctgatctttgatgagtgc
cactatgcacaagttgagagtgatcatccttatgctgagattatgaagatattttacaaa
cctgatgtagtaaaactgccccgtatatttggcatgactgcatctccaatatcaggaaaa
ggtgctactgttgaaggccttgagaccttacttcgctctaaggtgtattctgttgaagac
aaggatgaactggaacagtttgttgcatcacctaaggtgaatgtatactactatggtcct
ggcaccgcgtgcctaactaaagcttactttcagaagcttgaagagattaaaagccagtgt
gtgatggtgcttcacaagaaagcagctgatcatagcactctcaggaacacaaaaaagatg
ctcaagagactgcatggacatctaattttttctctggaaaacctaggtgtctttggggca
ttacaggctagttgcatcctcttaaagggggatcactatgagcgccatcaaatggtggaa
gctgatgttaatgctagtgatgactctttgtgtgacagatatctgagtcaggtcgctgca
gtgtttacttctggttgtgctaatgatggtatgaatcctgatttggcaattgtggaagtt
ctgaaggagccttatttctccaaaaagcttttacgtctaattggaatcctttccaacttc
ggggtacaaccagatatgaagtgcataatttttgtcaataggatcgtgactgcgagatct
ctttcatatatgcttcagcatctgaaagttttatcttcttggaagtgtgggtttcttgta
ggagtgcactcgggattgaagagtatgtcacgaaaaaatacagatatcattctcaataag
ttccgttctggtgagctcaacttattggttgccaccaaagttggcgaggaaggacttgat
atccagacatgctgcctcgttatacgatttgatcttcctgaaactgttgccagttttata
cagtctagagggcgtgcccgcatgccaaagtctgaatatgcatttttggttgatagtgat
aaccaaagggagcttaatttgatcgagcatttttcaagaaatgaagctcggatgaatgat
gagatttcttccaggaaatcttgcacgacagttatagattttcaggaaaatatatacaaa
gtagatatgactggtgcaaccatcagttctgcatcaagcatttcgttgcttcaccattat
tgttccaagcttccacgtgacgagtttttctgccccaagccgcagttcttctactttgat
gacatagatggaactatttgcaaattagttttaccttcaaatgctccaatgcatcaaatc
gtgagtgctcctcaatcttctatagaagcagctaagaaagatgcctgtttaagagcctgc
aagagcttgcatgaacttggagcactcactgactatcttttgccggatcaagcagatgaa
gatgaagacctgattcatggtttttctgactcagaaagctcagatggcgaagatgcacga
gaagagctccatgagatgattgttcccgctgcctttaaagaaccatggactgagacagag
agtcctgtttgccttaactcgtactacattaacttttcaccttgtccaattgatagggtt
tataaaaagtttggcctatttctgaaagcacctcttccccaagaggctgagagaatgaaa
cttgatctcaacttggctcgaggtagatctgtagagacagagcttattccatcaggagct
actaattttgagaacaatgagcaggtacaactagcagagaaattccagagaatgttcctc
aagatcattcttgaccgctctgagttcatttcagaatttgtatctttggaaaaacaagat
tctgttgactcagcttcaaaattttacctacttcttcccgtcaatttatgtggacacaat
aaaatttccatagactgggagcttgtcagaagatgcttgtcatcaccaatttttgggact
tcagtatatgcaggcaatagtgagatatccaaatttgatgagcagttgcaacttgccaat
ggttccaaaagcgtacatgatgttgccaatagtttggtatatgttccatgcaaggataca
tttttcttcatatctgatgttgtcaaagaaagcaatgcatacagcatatataaagattca
aaaaaccatgtcaaacactattatgatacttttggtatccatctttcgtaccctgagcaa
ccactaataaaagcaaaacaactcttctgtttggacaacttactacgaaagaaaggctat
tcagagttgcgtgataaagaggagcactttgttgaactacctgctgaaatttgccagctc
atgataattggattttccaaagatattgggagctcattatcactgttgccatcgatcatg
catcgtcttgaaagcttacttgtcgctattgaacttaagggctggctatctgcttctttc
cctgagggaagggaagtaacaatagatcatgttcttgaagcacttactacagagaaatgc
aatgaacctttttctcttgaaaggcttgaagtgcttggtgatgcatttctcaagtttgca
gttgggaggcatgtctttcttacatacgatgcctttgacgaaggacagttaactagaagg
cgctcaaacattgtgaacaattcctatctgtacacgatagcagtcagaaacaatttacag
gcatttattcgtgatcaatcatttgatcccaaccacttttatgtagtaggccgtccgtgc
cctgtaatctgtaacaaacaaacagaaaaaagcatacacggtcaatgtggtagtgtaacc
gatggtgcaaagactgaagttaggtgtagcaaatgtcatcagtggttgcgtaagaaaaca
attgctgatatagttgaagcccttgttggcgcttttgtagttgacagtggcttcaaagca
gcaattgcatttcttaaatgtattggtatctatacagatttcgaagaatcacaagtaaag
agtatttgcgctgcaagcaaagtctttatgccacttgctgatgaaatagatattcctgcc
attgaaaatttattaggttatccattcgtccataagggtttgctcattcaggccttcatc
catccatcatataacaaccacggaggaggttgctatcagagactggagtttctcggagat
gctgtcctcgattatttgatcacatcctatctatactctgtgtacccagatctgaagcct
gggcagttgactgatctgagatcagtttctgtaaacaacaacaccttcgcagttgttgca
gtacatcaaagcttccacagccgtatactctgtgattctagtgacctccgtgagtcaatt
actagatatgtcaatttcattggaagaccagattctatgaaaaggctggctgaagagcca
tcttgtccaaaggcccttggcgacctggtggagtcttgtatgggtgcaatcctgcttgac
acagggtttgacttgaaccgtgcttggcatataatgctctccttcttaaagcccgtcatg
agctttaccaggttgcagcataatccaaaaagagaactccatgaactttgccagtttcat
ggctggcatctaaagttcctggtttcaaaaaaagatagcaaatatctagttgaggccaat
gtgagtgggaagaatgtttctgaagcggcttctgctcccaatatcaataaaaaagctgcc
aaaagaatggctgcccagcaagtactttcaagcttgacggctcaaggctataggcgcaag
tctaaatcactggagcaagtggtaaaaacagctaaaaagatggaagctaaactgatagga
tatgatgaaacaccctgtgttcttactgctaggtgcaatgacgtggagaagaacgaagca
tctgaaagtgatcgtgacttgatagtattccctattagtgaagaacttgcaagaaattgc
aatttcaagttaaagcctgcgagaaagttggccccagaggcagctgtacaatgcaattct
gagcagaccatcatgcctaatggttctaattcagattcaaaagctacaggtggtgcaata
aatggatcggcaaagtcaattttgcatgaagtttgtgctgccaactgctggaaacctcct
agatttgaatgttgcaaggagacagggccaagccacttgaaagacctatggcacctacct
nctcgggcgaaaaagaaagatgcagctgaggatgcagcggaaggggcactttggttcttg
aagcaggaaggatatatgttcaataactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system