KEGG   Nicotiana tabacum (common tobacco): 107815035
Entry
107815035         CDS       T04643                                 
Name
(RefSeq) uncharacterized LOC107815035
  KO
K14311  nuclear pore complex protein Nup188
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107815035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107815035
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107815035
SSDB
Other DBs
NCBI-GeneID: 107815035
NCBI-ProteinID: XP_016496025
UniProt: A0A1S4C4G3
Position
Un
AA seq 1969 aa
MATPTKANDEVTVDASLWWEPFTELLTELESVSLSSDLPPLLEKKIKDNHAWFLHTISLF
KPPNQKSRDALDAGRLKIGPHQITVETDKKAAALKISSAMCLDEVQSYILVHRTSNQKSM
VADSVFRELSHLVMLQYYMERQCLLKCTRLIITQALYIPTISEDASIVNEAQKLISEGLD
TKLLSVLQENLVANFSEYMDVDLYTLWAEEIVTEDNLILDVLFLIFYEFSPCTGELWKKL
CSLYEGFISNSYNFRKLAVSAEAVSSIYHAKVQLLLILIETLDLENLLQMVHDETPFGQG
HATFSLSEVQEIDAMVSTFDVFEQKESGPLILAWAVFLCLISSLPGKEENNILMEMDHIG
YVRQAFEAGSLSFFLEIIENDVLRDFDGPIVGLRSVLRTFISAFIASYEINIQLEDGNLK
LILDILCKIYQGEGSLCTQFWDRDSFVDGPIRCLLCSLEGEFPFRSAELLQLLSALCEGA
WPAECVFNFLDKSTGLSSPVDISSCLIVDDASQTVKVVQPLHLPGVEGLIIPSGTLGHLL
KMIDRNTALVRWEFSRSGVFMLLLSLAQGPYLEKTSEVLLTLRLLSRLVTFNMGVCSALL
DLGGGYMHDEMNSPTENLRLNVAEIICAWIKNLSPNCSDVGLMSMGVNILAKMLKCSPYH
VSRLIVQANIFDVAFKTNPFRIGSNGLSSGSWLLSGRLSKMLLIDCEQNDCQLTLSVLDL
TMQLVDAGMENDVVLALVIFSIQYVLVNHEFWNYKVKHARWKVTLKVLEVLKKCILSISN
IQKLGEVVRDILLGDSSIHSALFRLVCTTSDGLEKLYFSRLYGLTEIEGLQQAIVLGLDI
LSSMLSDLSRDVPNFIVFHQAIMSSMTKPVPVVTAAISLMSFFRNPKIQVGAARLQSRLF
VIADDSQSCALSNAYFGLDDKQIYNFKNTICSILCQEKVESEDLIIATFKMLASAARYQA
SFLTAVIALRENPISESCNGDNQPGDNDALQCTAANILDSIWVYVKRADDLVMTKAHILC
NMLNFLNALWEGAAHYTNLLKQLRNSDFWKKLLNSVVLSIGKNSCQSESATKLELQNLVY
RYLCQHNVLDVMAYEMFLQRKILHSELVKKESSKALHNGSDGSKVPTPESASNLKDIFGV
WCGSSLDAETIKTFVSFEYDDSVNLHARVAAGLFAVRVMCKVKSGDRGSLSVSLIDKVTN
LWQKLRKLPAFSELIGYYAQRGYSGGNELDDLILNDLFYHLQGELEGRQISHRPFKELSQ
YLLESDILQTYRRKHDEDIFPQTDGVCLYDTDRLQGDMAIDLWDISDWKASKAVAEALLL
SLQNVNLMVSLTRSKLSALIALTTAFSISDNVDLVENEVKTARNFPEKLLSSSIDNICES
LTRTIELLAPVPDASKDIVEILAAQADLLFRFTRSLNAQLSLSMCLLILKTAGYGLKVLS
NCRPLSTGVLSTMKIFLELILFSLKSSWKDSRLGVRTEIEHSEVSPEAANVSLGLLPLLC
NCIELTGHCSISMIIIDQVLKGFSTPATWFPIIQKHLPMQHIVLKLQDKSSYSVIDIILK
FLLTIAHVKEGAEMLLNAGFFASLRVLLADLSNGRPLSVDENERNLANSFENNERSPPIW
GLSLAVVTAIINSLGETSILNVDHVVTYFFLEKADLISYYLSAPDFPSDDHDKKRPRALK
PHTSLSALRESENTVMLICVLAKHRNAWSRAMKELESQLRERCIHLLAFISCGTQPYGES
PGRAPPIFCHPTVREEYEWHKKPSSINSKKGWFALSALCCGLNPKYSSFSSRTAIVIKDQ
PNEHANLTTQSHFSDAMSIQIYRITCLLLKFLCLQAEEAAERAEEAGFVDLARFPELPMP
DILHCLQDQGISIITELCEANKLKQVTSEIQGVCILLLQITVMALYLEFCVIQICGMRPV
HGRVEDFSKEFHALSKAAEGHAFLKESMNSLKQMVSFVYPELLYAEDML
NT seq 5910 nt   +upstreamnt  +downstreamnt
atggcgacacctacaaaagctaatgatgaagtgactgttgatgcttcgctttggtgggag
cccttcactgagttgcttactgaactcgaatctgtttctctctcctccgacctccctcct
cttctggagaagaagataaaggacaaccacgcttggtttttgcacacaatttcactattt
aagccaccaaatcagaaatcaagagacgctttagatgcgggacgactaaagattggtcca
caccagattacggtagaaactgataaaaaagcagcagccttgaaaattagttctgctatg
tgtttagatgaggtgcagtcatatattcttgttcatagaacgagtaatcaaaaaagtatg
gttgctgatagtgtgtttcgcgagctttctcatttggttatgcttcaatattatatggaa
cggcaatgtctcttgaagtgcacgcggctgataattacgcaagctttatatattccgaca
atttctgaagatgcatctattgtgaatgaggcacagaaattgatttctgagggactagac
acgaagttgctttctgttctgcaggagaatctggtggccaacttttctgagtacatggat
gttgacctttatactttgtgggctgaggaaatagtaaccgaagacaatctgatattggat
gttcttttcctcattttttatgagttcagcccctgcactggtgagctgtggaaaaaattg
tgctcactttatgagggattcatttcaaattcttataatttcaggaagctggccgtatca
gccgaagccgtttcctccatttatcatgccaaagtgcagctgctgcttatcctcatagaa
actttggatttggaaaatcttttgcagatggttcatgatgaaactccgttcgggcagggc
catgctactttttcattgtccgaggtgcaagaaatcgatgctatggtgtccacttttgat
gtatttgagcagaaagaatcaggaccattgattttggcatgggcggttttcctctgtcta
atttcatctcttcctggaaaagaagaaaataatatactgatggagatggatcatattggt
tatgtccgccaagctttcgaagctggatctttgagcttttttcttgaaattatcgaaaat
gatgtactgagggattttgatggtcctattgttggtcttagaagcgttttacggacattt
atatcagcatttattgcctcttacgagatcaatatccagttggaggatggtaacctgaaa
ttgatattggatattctttgcaaaatttatcaaggagaggggtccctctgtacccagttt
tgggatagggatagttttgttgatggtcctatcaggtgccttctttgcagcttggagggt
gaattcccttttagatctgctgaacttttacagttgttatcagcactttgtgaaggagca
tggcctgcggaatgtgtatttaactttcttgacaagtccactggattgtcatctcctgtt
gatatcagtagctgtttgatagtggatgatgcttctcagactgttaaggtggtccaaccg
ttacaccttcccggtgttgagggtctgatcattcctagtggaacccttggtcatctgtta
aaaatgatcgataggaatactgctctagtgagatgggagttttcgcgatctggggttttc
atgcttcttttgagtttggcccaagggccgtacttggagaaaaccagtgaagtccttctg
actcttcggttgctcagccgacttgtgactttcaacatgggtgtttgttctgctcttctg
gaccttggtggtggctatatgcatgatgagatgaactcaccaacagaaaacttgcgtctt
aatgtggctgagatcatttgtgcttggatcaagaatttgtctcctaattgctctgatgta
gggttgatgtcgatgggagttaacattttggcaaagatgttaaaatgctcaccgtatcat
gtttccagattgatagtccaggcgaatatctttgatgttgcgtttaaaacaaatcctttc
agaattggctccaatggcctgtcgagtggatcgtggttgctttctggtcggctctcaaaa
atgcttttgatcgactgtgagcagaatgattgtcaattgactctttcagtgcttgacctc
accatgcagcttgtggatgctggaatggaaaatgatgttgtccttgcacttgtcattttc
tccattcagtatgtccttgttaatcatgaattctggaattataaagtcaagcatgctcgc
tggaaggtgactctgaaggtgcttgaagtattgaagaaatgcattctgtcaatttcaaat
atccagaaacttggtgaagtggtcagggatattttacttggtgattcttcaatccacagt
gcactatttcgacttgtttgtacaacttcagatggcctggagaagctctattttagccgg
ctttatgggctgacagaaatcgaaggattacaacaggcaattgtcttgggattggatatt
ctttccagtatgctttctgatctctcaagggatgtgcccaattttattgtctttcatcag
gcaatcatgtcatcaatgacaaaaccagtgcctgtggttactgcagcgatatcattgatg
tcattcttccgaaatcctaagatacaggtgggtgctgcaagactgcaatccagattgttt
gttattgcagacgactcgcaatcatgtgcgcttagcaatgcatattttggtctggatgac
aagcagatctataattttaaaaatacgatttgtagcattctttgtcaagagaaggtagaa
agtgaggatctcataattgctactttcaagatgcttgcttctgctgcacgttatcaggct
tcttttcttaccgctgtgattgctttgagagaaaatccaatttctgaatcatgcaatggt
gacaatcaacctggagacaatgatgcattgcagtgcactgctgcaaatatattagattcc
atatgggtttatgttaaaagagctgatgatcttgtgatgaccaaagcacatatactgtgt
aatatgctaaacttcctaaacgcattatgggaaggagctgctcattatacaaatctcctg
aagcagctgagaaactcagacttctggaaaaagctattgaattctgtggtgctttctatt
ggtaagaatagttgccaatctgaaagtgcgactaaattggagcttcaaaatctggtatac
agatatctatgtcaacataatgtattggatgtaatggcctatgagatgttcctgcagaga
aagattttacattctgagttggtcaaaaaagaatcttccaaagcattgcataatgggtct
gatggctctaaagtaccaacacctgaaagtgcatctaacctgaaggatatttttggagtg
tggtgtgggagctcattggatgcggagactatcaagacgtttgtttcatttgagtatgat
gattctgtaaatctgcatgcaagggttgctgctggtttatttgctgtgcgggtgatgtgt
aaagtgaaaagcggtgatagaggaagtttgtctgtttcacttatcgataaagttactaac
ttgtggcaaaagttgaggaagttaccagccttttctgagttgataggttattatgcacag
cgtggttatagtggaggaaatgaattggatgacttaattctcaatgatctattctatcat
ctgcaaggagagcttgaaggtagacagatctcccacagaccattcaaggagctgtcacaa
tatctgctagagtcagatattttgcaaacatatcgccgtaagcacgatgaggacattttc
cctcaaactgatggtgtctgcttgtatgacactgatcgtctgcaaggggacatggcaatt
gatttgtgggatatttcggattggaaagcatctaaagcggttgcagaagcgctgttgctc
tcgttgcagaatgtgaatttaatggtgtcactcacaagatccaagctttcagctttaata
gctttgacaacagctttctccatatctgacaatgttgatttagttgagaacgaggttaaa
actgccagaaattttcctgaaaaattattgtcatctagcattgacaatatatgcgagtct
ctcacccgcacaatcgagctgttagccccagtccctgatgctagtaaagacatagttgaa
attcttgcagctcaagcagacctgcttttccgctttaccaggtcgctgaatgcacagttg
tctttatctatgtgccttctcatattaaaaactgcaggttatggcctcaaggtgttgagc
aactgtaggccattgtctactggtgtccttagtacaatgaaaatatttctggagctgatt
ctcttttcactcaagtcaagttggaaagattctcgccttggtgtacgaacagaaattgag
catagcgaagtctcacctgaggcagctaatgtgagcttggggctactaccattgctttgc
aactgtatagaacttactggacattgctccatctctatgattattatcgaccaagtactc
aaaggtttttcaacacctgccacttggttccctatcattcaaaagcatcttccgatgcag
catattgttcttaaacttcaagacaaaagctcctattcagtcattgacataatattgaag
tttcttttgactattgcacatgtgaaggaaggtgctgagatgcttctgaatgctggtttc
tttgcatcgttaagagtgttgttagctgatctatctaatggtagacctctctcagtagat
gagaatgagagaaatctggcaaactcctttgagaataatgaaaggtctccacccatttgg
ggacttagcttggctgtggttacagcaattattaactctttaggagaaacttcgatttta
aatgtggatcacgtggtgacttacttcttcttggagaaggctgatctaatttcatattat
cttagtgctccggattttccatcagatgatcatgataagaaaagacctcgggcactcaaa
ccacatacttctttgagtgctcttagagagagtgaaaacacggttatgttaatctgtgtt
ctggcaaagcacaggaatgcctggtcaagggccatgaaagaattggaatcacagttaagg
gaaagatgcatccatttattggcctttattagctgcggtacacagccttatggggaatcg
ccaggaagagctccccccatcttttgtcatcctaccgtccgagaggagtacgagtggcac
aaaaagccatcatctatcaatagcaaaaagggctggtttgctctttctgctctttgctgc
ggtctaaatcccaaatattcatctttttcgtcaagaactgctattgtgatcaaagatcaa
ccaaatgagcatgctaatctgactacgcagtctcatttttcagatgcaatgtccattcag
atatacagaattacctgtcttcttctcaagtttttatgtctacaagctgaagaagctgct
gaaagggctgaagaagcgggttttgtcgatcttgcacgtttcccagagctaccaatgcct
gatatccttcactgtttgcaggatcaaggaatatctatcatcactgaattgtgtgaagcc
aacaagttgaagcaggttacttctgaaatacaaggggtctgtattctactgttgcaaata
acagtaatggcattgtacctggaattttgtgtgatccaaatctgtggaatgagacctgtc
catggacgtgttgaggacttctcaaaggaatttcatgcactgagtaaagctgcggaagga
catgcatttttaaaagaatctatgaactcgttaaagcaaatggtatctttcgtgtatcct
gaattattatacgcagaagatatgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system