KEGG   Nicotiana tabacum (common tobacco): 107822563
Entry
107822563         CDS       T04643                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57-like
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nta03009]
    107822563
Enzymes [BR:nta01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107822563
Ribosome biogenesis [BR:nta03009]
 Eukaryotic type
  90S particles
   Helicases
    107822563
SSDB
Motif
Pfam: Helicase_C DEAD UTP25 ResIII SLAM ParD_antitoxin
Other DBs
NCBI-GeneID: 107822563
NCBI-ProteinID: XP_016504604
UniProt: A0A1S4CUD5
Position
Un
AA seq 517 aa
MEKDASFLFGGITFNRKKFATDFDRFKEHKTRDNSLEKLEFVENEKSEMEDETNTRVGKK
RKRKEKGVVPDSVDGFSVFKNSKLQKESASEENDQSANELLEGKKEYYRQLERDAIFRKL
HGIHASGSNVPSPLHSFAELRSRYKCRLYLLRNLAELGFKEPTPIQRQAIPVLLSVVGHL
TAIFLDQDTSNDGVRAVILSPTKELAAQTTRECRKLAKGKKFYIRLMTKKLAKSGDFSKL
RCDILISTPLRLQFAIRKGKLDLSRVEFLVLDESDKLFEPGLLEQVDFVVNACTNPSILR
SLFSATLPDIVEDRARTIMHDAVRVIIGRKNSASETIKQKLVFVGSEEGKLLALRQSFAE
RLSPPVLVFVQNKERAKELYDELKLEDFRADVIHSDLSQTQRENAVDNFRAGKTWVLIAT
DVVSRGMDFKGVNCVINYDFPDAAAAYIHRIGRTGRAGRRGEAITFYTEADIPFLRNIAN
VITSSGGEVPEWIMSMTKKQWKKHRPQRETISTQPDI
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggaaaaagatgcatcttttttgtttggcggcatcactttcaatcgtaaaaagtttgcc
accgattttgacaggtttaaggagcataaaacaagggacaattcattagagaagctggag
ttcgttgaaaatgaaaaatctgaaatggaagatgagacaaatacccgtgtgggtaagaag
aggaagagaaaggagaaaggagtagttcctgactcggtggacggattttccgtcttcaag
aattcgaaattgcaaaaggaatctgccagtgaagagaatgatcaatctgcaaatgaattg
cttgagggaaaaaaagaatattatcggcaattggagagggatgcaattttccggaagtta
catggcattcatgcttctggaagtaatgtcccttcgccattgcacagttttgcagaatta
agatcaagatataaatgtcgattatatctattacgcaacctggcagaactgggatttaaa
gaaccaacaccaatccaaagacaggctattccagtcctcttatctgttgttggacatctg
acagccatctttcttgatcaggatacttcaaatgatggtgtccgagctgtaattctttcc
cctacaaaagagttagctgctcagactacaagagaatgccgaaagttggctaaagggaag
aagttctacatcaggttgatgactaaaaagctcgctaaaagtggagacttttctaaactg
cgatgtgatatactcatctcgacaccattgcgcttacagtttgctatccgcaaaggaaag
cttgatttaagtagggttgaatttcttgtcttagatgaatctgataagctttttgagcct
ggcttgctagagcaggttgattttgtggtgaacgcgtgcacaaatccttcaattcttcgg
tcgttgttcagtgctactttacctgatatagttgaagacagagcacgtacaataatgcat
gatgctgttcgagtcattattggtaggaaaaattctgcttccgaaacaataaagcaaaag
ttggtattcgtagggagtgaagaaggaaaacttctagctcttcgtcaaagctttgcagag
agattgagtccaccggtgctagtattcgttcaaaacaaggagcgtgcaaaggagctatat
gacgaactaaaattggaagattttcgagctgatgttatccattcagatctttctcagaca
cagagagaaaatgctgttgataactttagagctggaaaaacatgggttctaattgccacg
gatgttgtgtcccggggaatggatttcaaaggggtcaattgcgtaataaattatgatttt
ccagacgctgctgcagcatacattcacagaattggacgtaccggaagagcaggaagaaga
ggagaggcgattacattttatactgaagcagatattccttttttgaggaacatagcaaat
gttattacttcttctggtggtgaggttcccgagtggattatgtcaatgaccaagaaacag
tggaagaaacacaggccacaaagagaaaccatttcaactcagccagacatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system