KEGG   Nicotiana tabacum (common tobacco): 107827641
Entry
107827641         CDS       T04643                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107827641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107827641
   03400 DNA repair and recombination proteins [BR:nta03400]
    107827641
Spliceosome [BR:nta03041]
 Complex B
  Other components
   Prp19 complex
    107827641
 Complex C
   Prp19-CDC5 complex
    107827641
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107827641
SSDB
Motif
Pfam: BCAS2 Spectrin THOC7 bZIP_1 YabA
Other DBs
NCBI-GeneID: 107827641
NCBI-ProteinID: XP_016510304
UniProt: A0A1S4DAR2
Position
Un
AA seq 250 aa
MATTNGDVLMLEAPPESRPAVCSSAEVIDALPYIDDDYGDPKVKEEVDRLVEEEMRRSSK
KPSDFLKDLPPLPKFNFENHPMLAREYERVRAGKPPVQIDTSRYGLEVPPLNKRNDETAW
KQALQKAQRLLQHQVIRLENLDLMSKHGPDVWKLHNQRLEAFLARMQSQAVELNEMIETV
NRERKYHQQTTAYELSALSMQWKELCLKNMEIQSACGELEDHIEQLKKEAQERDWNLEAN
VENSKMLYAE
NT seq 753 nt   +upstreamnt  +downstreamnt
atggcgacaacaaacggtgacgttttaatgctagaggcaccgccggagtcccggccggcg
gtgtgtagtagtgctgaagtgatcgatgctttgccgtacattgatgacgactacggtgac
cccaaagttaaagaagaggtggaccgtttggtcgaagaggagatgcgccgcagctccaaa
aaaccttccgatttcctcaaggacctccctcctcttcctaaattcaacttcgagaatcac
ccgatgcttgcgagggaatatgagagggtgagagctggaaagccgccggtacagatagat
acttcacgatatggacttgaagtgccgccactgaacaaacgcaatgatgaaactgcatgg
aaacaagcgcttcaaaaagctcagcgtttactgcagcatcaagtaatcaggctagaaaat
ctggacctgatgtcaaagcatggtcctgatgtgtggaagctgcacaatcaacgactggaa
gcatttttagccagaatgcaatcacaagctgttgaactgaatgaaatgattgaaaccgta
aacagggaaaggaaatatcatcagcaaactactgcatatgagctcagtgcgttgtccatg
caatggaaagagctctgtctgaaaaatatggaaatccaatctgcttgtggggaactggaa
gaccacatagaacaactgaagaaggaggctcaagagagggactggaatttggaggctaat
gttgagaatagcaaaatgctgtatgcagaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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