KEGG T06079: D5366

Neokomagataea tanensis: D5366_00495

Entry

D5366_00495       CDS       T06079

Name

(GenBank) class I SAM-dependent RNA methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

ntn Neokomagataea tanensis

Brite

KEGG Orthology (KO) [BR:ntn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ntn03009]
    D5366_00495
Enzymes [BR:ntn01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     D5366_00495
Ribosome biogenesis [BR:ntn03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    D5366_00495

SSDB

Motif

Pfam:

tRNA_U5-meth_tr TRAM PDGF Marek_SORF3

Other DBs

NCBI-ProteinID:

QDH23996

UniProt:

A0A4Y6V604

Position

109831..111171

AA seq 446 aa
MDVITMMNNAMSGVLNAKIEGLGTTGDGVFYHDGKTYFLPNTLPGETVSFRFTGDTPELI
DILEASNSRVQPSCTIINDCGGCAVQHMTLPALLSWKTDRITRLLSSVFSDVPEPAHYQT
PPRTRRRMDLAVQRIPGGVHIGLHARNGDPVDMIACDVLAPELFELLTPLRDVLAGLGAL
TGRADLQINLLDTGPDLTLSTPTALSSADRAKLAAFAREHNIRRIAWTPIGKREIETVAQ
SRAPTIRFGSADVTPPPAAFLQASREAERVIQDAVLAGLPALNKKDIIVELYAGCGTLTL
PMSDNGRVIAYEGDVSAAASLRTASGGRRIDAHTRDLVRQPLLPPDLKTARVVVLDPPYT
GAGPQIEPLARSTVKDLVYVSCNPAALKKDLQTLHKAGFELISSTVVDQFLWSTEVETVV
VLSRDPKRIKRESSRRSRSAPSHSDS

NT seq 1341 nt +upstreamnt +downstreamnt
atggacgtcattacgatgatgaataatgcaatgagtggtgttctgaacgctaaaattgaa
ggtctaggcacgacaggcgacggtgtgttttaccacgacggtaaaacatacttcctgccc
aacaccttacccggggaaaccgtttcattccgttttacgggtgatacacctgagttgata
gacatccttgaggcttcgaacagtcgcgtccagccttcctgtacaatcattaacgactgt
ggcggctgcgcagtgcagcacatgacactccctgcattactgtcatggaaaaccgaccgt
atcacacgtctgcttagcagtgtgttttcggacgttcccgagccagcccattaccaaaca
cccccacgtacacggcgcagaatggaccttgctgttcagcgcatacccggtggtgtgcat
ataggcctgcatgcccgcaacggtgaccccgtggatatgattgcgtgcgacgttctggcc
cctgagctttttgaacttctaacgcccctacgcgatgttttggctggtttgggagcccta
acaggacgtgccgatctccaaataaacctgctggataccgggcctgaccttaccctatca
acgccaacagccctgtcctcagccgaccgtgcgaaactagcagccttcgcgcgtgagcat
aatatccgccgcattgcttggacgccgatcggcaagcgcgaaatcgaaactgttgcgcag
tcccgcgctcccacgattcgctttggctccgccgatgtaacgccacctcccgctgctttt
ttacaagcatcgagagaggccgagcgcgtgatccaagatgccgtccttgcgggcttacct
gcactcaacaaaaaagatattattgttgagctttacgcaggctgcggtacgctcacctta
ccaatgtccgataatggtcgggttatcgcgtatgaaggtgatgtctctgcagcggcaagt
ctgcggacggcctcaggcggacgccgcattgacgcccacacgcgcgaccttgttcgccag
ccattactaccgccagaccttaaaacagcacgagttgttgtcctagacccgccatacact
ggcgctggccctcaaatcgagccactcgcacgttcaactgttaaagatcttgtctatgtt
agctgcaatccagctgcgctcaagaaagatctgcaaacgcttcacaaagctggttttgaa
ctgatcagcagcactgtagtggaccagttcctttggtccactgaagttgagacagtcgtc
gtgctctcacgggatcccaaaaggatcaaacgtgaaagctctcgccgcagccgcagcgcc
ccttctcattcggattcttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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