KEGG   Nicotiana tomentosiformis: 104094311
Entry
104094311         CDS       T05025                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03420  Nucleotide excision repair
nto04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104094311
  09124 Replication and repair
   03420 Nucleotide excision repair
    104094311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:nto03051]
    104094311
   03400 DNA repair and recombination proteins [BR:nto03400]
    104094311
Proteasome [BR:nto03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    104094311
DNA repair and recombination proteins [BR:nto03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      104094311
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin CUE Rad60-SLD TECR_N UBA_3 Ubiquitin_2
Other DBs
NCBI-GeneID: 104094311
NCBI-ProteinID: XP_009598520
Position
Unknown
AA seq 367 aa
MKLTVKTLKGSHFEIRVQPSDTIIAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLL
ENNVSEDGFLVVMLSKSKTAGSSGTSSAPQPSAPTVNPTPAPEVTPPAPEPKDVASASDA
ATASLPTDNFSQAASNLVAGDNLEQTIQQIMEMGGGNWDKETVTRALRAAYNNPERAIDY
LYSGIPETAEVAVPVASSGVNSAIGTTTVPAAPVSGAPNSAPLNLFPQENVAGAGGAALG
SLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRMIQEHHQEFLQLINEPVDG
SDGDIFDQPEQDMPHTVSVTPQEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLE
HAGDYED
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgaagcttactgtgaagactctgaaaggcagtcacttcgaaattagggttcagccctcc
gataccattatcgcagtcaagaaaaacattgaggatatacagggaaaagataattatcca
tgtggacagcagttactgattcacaatggtaaggttttgaaggatgaaagcacgttattg
gaaaataatgtttctgaagatggctttcttgttgtcatgcttagcaagagcaagactgct
ggttcaagtgggacgtcatctgcaccgcagccttcagctcctacagtcaacccaactcca
gcacctgaagtgactccaccagcaccggaacctaaggatgttgcatcagcttctgatgct
gcaacagctagtcttccaactgataattttagtcaagctgcatcaaatctagttgctgga
gataatcttgagcagacaatacaacaaattatggaaatgggtggtggcaactgggataaa
gaaacagtgacacgggcacttagagcagcttataacaatcctgaaagggctattgattac
ttgtattcagggattcctgaaacagcagaagttgctgtaccagtagctagtagcggggtt
aattctgcaatagggactactacagtgcctgctgcccctgtttctggagcacccaattca
gctcctttaaatttgtttccgcaggagaatgttgctggtgctggtggtgctgcccttgga
tcccttgattttctcaggaataaccaacagtttcaagcattacgttctatggttcaatct
aacccgcaaattctacagcctatgcttcaggaacttggaaagcaaaatcctcaacttttg
agaatgatacaagagcaccatcaagagtttcttcaactaatcaatgaacctgtagatggt
tctgatggggacatatttgatcagcctgagcaggacatgccccacacagttagtgtcact
ccacaagagcaggaggcgatcgagcgactcgaggctatgggttttgatcgagctcttgtt
attgaggcctttttagcttgtgatcgcaatgaggaactagctgcaaattatttattggag
catgcaggagattacgaagattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (8)   
   Pfam (8)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system